recent Publications   papers, preprints, thesis, preparations, and posters


  2003

Repeats and correlations in human DNA sequences
D. Holste, S.Beirer, P. Schieg, I. Grosse, and H. Herzel
Phys. Rev. E 67: 1-9 Article No. 061913 | Abstract, PDF or Mail the author

Does 'mapping' reveal correlation between gene expression and protein-protein interaction?
R. Mrowka, W. Liebermeister, and D. Holste
Nature Genet. 33:15-16 | Abstract or Mail the author

  2002

Identification and Analysis of biological features in DNA primary structures
D. Holste
Doctoral thesis, ISBN 3-89722-979-X, Logos-Verlag

  2001

Repeats in human genomic DNA and sequence heterogeneity
D. Holste, I. Grosse, and H. Herzel
Berlin Boston Biophysics Bioinformatics Workshop, Talk on Genome Analysis | GZipped PS (4.6 Mb) or Mail the author

Coding potential of DNA sequences under consideration of gene expression
D. Holste, I. Grosse, and H. Herzel
Berlin Boston Biophysics Bioinformatics Workshop Poster on Genome and Gene Expression Analysis | GZipped PS (5 Mb) or Mail the author

Repeats in human genomic DNA and sequence heterogeneity
D. Holste, I. Grosse, and H. Herzel
Intelligenty Systems for Molecular Biology, Poster session on Whole Genome Analysis | GZipped PS (191 Kb) or Mail the author

Statistical analysis of the DNA sequence of human chromosome 22
D. Holste, I. Grosse, and H. Herzel
Phys. Rev. E 64: 1-9 Article No. 041917 | Abstract, PDF or Mail the author

  2000

Are non-coding sequences of R. prowazekii remnants of `neutralized' genes?
D. Holste, O. Weiss, I. Grosse, and H. Herzel
J. Mol. Evol. 51: 335-362 | GZipped PS (673 Kb), GZipped PDF (345 Kb), or Mail the author

Optimization of coding potentials using positional dependence of nucleotide frequencies
D. Holste, I. Grosse, S. V. Buldyrev, H. E. Stanley, and H. Herzel
J. Theor. Biol. 206: 525-537 | GZipped PS (229 Kb), GZipped PDF (186 Kb), or Mail the author

Are non-coding sequences of R. prowazekii remnants of `neutralized' genes?
D. Holste, O. Weiss, I. Grosse, and H. Herzel
Theoretical Biophysics Workshop, Talk on DNA Sequence Analysis | GZipped PS (1.5 Mb) or Mail the author

Average Mutual Information of Coding and Noncoding DNA
I. Große, Sergey V.Buldyrev, H. Eugene Stanley, D. Holste, and H. Herzel
Pac. Symp. Biocomput. 5: 611-620 | GZipped PS (84 Kb) or Mail the author

  1999

Mutual information analysis of surrogate networks
D. Holste, D. Beule, W. Liebermeister, J. Schuchhardt, and H. Herzel
Theory and Mathematics in Biology and Medicine, Poster session on Genetic Networks | GZipped PS (1.6 Mb) or Mail the author

Using Surrogate Genetic Networks to Assess Reverse Engineering Methods
D. Beule, D. Holste, J. Schuchhardt, and H. Herzel
Theory and Mathematics in Biology and Medicine, Talk on Genetic Networks | Mail the author

  1998

Bayes' estimators of generalized entropies
D. Holste, I. Große, and H. Herzel
J. Phys. A: Math. Gen. 31: 2551-2566 | GZipped PS (159 Kb), GZipped PDF (213 Kb), or Mail the author

Entropy estimation from finite data samples
D. Holste, I. Große, and H. Herzel
ICCS Proceedings: 589-596
GZipped PS (133 Kb) or Mail the author

  1997

Entropy estimates and their limitations: the statistical analysis of symbol sets
D. Holste
Max Planck Conference of Berlin Physics Students, Talk | GZipped PS (122 Kb) or Mail the author

Statistische Analyse mit verallgemeinerten Entropien
D. Holste
Diplom thesis
Institute for Physics, Humboldt University at Berlin | GZipped PS (2.8Mb) or Mail the author

  1996

Binary sequences carrying low autocorrelations
D. Holste
Technical Report
Institute for Physics, Humboldt University at Berlin | Mail the author

  1995

Spatial and dynamical aspects of generalized Brownian motion
D. Holste
Master thesis | Department of Environmental Engineering, University College London
Mail the author


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Last modified: Tue Mar 12 17:57:51 CET 2002

There is a crack in everything,
that's how the light gets in.   -Loenard Cohen