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publications:start [2017/11/14 14:31] nilspublications:start [2018/05/26 08:02] nils
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 +//Note that this publication list is automatically updated and therefore
 +may be incomplete or could contain papers which are not by ITB
 +authors. // 
 //Note that this publication list is automatically updated and therefore //Note that this publication list is automatically updated and therefore
 may be incomplete or could contain papers which are not by ITB may be incomplete or could contain papers which are not by ITB
 authors. //  authors. // 
  
-=== 2017 ===+=== 2018 ===
  
-Michael E Hughes, Katherine C Abruzzi, Ravi Allada, Ron Anafi, Alaaddin Bulak Arpat, Gad Asher, Pierre Baldi, Charissa de Bekker, Deborah Bell-PedersenJustin BlauSteve BrownM Fernanda Ceriani, Zheng Chen, Joanna C Chiu, Juergen Cox, Alexander M Crowell, Jason P DeBruyne, Derk-Jan Dijk, Luciano DiTacchio, Francis J Doyle, Giles E Duffield, Jay C Dunlap, Kristin Eckel-Mahan, Karyn A Esser, Garret A FitzGerald, Daniel B Forger, Lauren J Francey, Ying-Hui Fu, Frédéric Gachon, David Gatfield, Paul de Goede, Susan S Golden, Carla Green, John Harer, Stacey Harmer, Jeff Haspel, Michael H Hastings, Hanspeter Herzel, Erik D Herzog, Christy Hoffmann, Christian Hong, Jacob J Hughey, Jennifer M Hurley, Horacio O de la Iglesia, Carl Johnson, Steve A Kay, Nobuya Koike, Karl Kornacker, Achim Kramer, Katja Lamia, Tanya Leise, Scott A Lewis, Jiajia Li, Xiaodong Li, Andrew C Liu, Jennifer J Loros, Tami A Martino, Jerome S Menet, Martha Merrow, Andrew J Millar, Todd Mockler, Felix Naef, Emi Nagoshi, Michael N Nitabach, Maria Olmedo, Dmitri A Nusinow, Louis J Ptáček, David Rand, Akhilesh B Reddy, Maria S Robles, Till Roenneberg, Michael Rosbash, Marc D Ruben, Samuel S C Rund, Aziz Sancar, Paolo Sassone-Corsi, Amita Sehgal, Scott Sherrill-Mix, Debra J Skene, Kai-Florian Storch, Joseph S Takahashi, Hiroki R Ueda, Han Wang, Charles Weitz, Pål O Westermark, Herman Wijnen, Ying Xu, Gang Wu, Seung-Hee Yoo, Michael Young, Eric Erquan Zhang, Tomasz Zielinski, John B Hogenesch, 2017, Guidelines for Genome-Scale Analysis of Biological Rhythms. J. Biol. Rhythms, ,  748730417728663  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29098954%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1177/0748730417728663|(full text)]] +Rukeia El-AthmanAngela Relógio2018Escaping Circadian Regulation: An Emerging Hallmark of Cancer? Cell Syst6,  266-267  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29596780%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1016/j.cels.2018.03.006|(full text)]] 
  
  
-Tiziano D'AlbisRichard Kempter2017A single-cell spiking model for the origin of grid-cell patternsPLoS ComputBiol., 13,  e1005782  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28968386%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pcbi.1005782|(full text)]] +Rolf ApweilerTim BeissbarthMichael R BertholdNils Blüthgen, Yvonne Burmeister, Olaf Dammann, Andreas Deutsch, Friedrich Feuerhake, Andre Franke, Jan Hasenauer, Steve Hoffmann, Thomas Höfer, Peter Lm Jansen, Lars Kaderali, Ursula Klingmüller, Ina Koch, Oliver Kohlbacher, Lars Kuepfer, Frank Lammert, Dieter Maier, Nico Pfeifer, Nicole Radde, Markus Rehm, Ingo Roeder, Julio Saez-Rodriguez, Ulrich Sax, Bernd Schmeck, Andreas Schuppert, Bernd Seilheimer, Fabian J Theis, Julio Vera, Olaf Wolkenhauer, 2018, Whither systems medicine? ExpMolMed., 50,  e453  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29497170%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/emm.2017.290|(full text)]] 
  
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 +Christian Beck, Henning Knoop, Ralf Steuer, 2018, Modules of co-occurrence in the cyanobacterial pan-genome reveal functional associations between groups of ortholog genes. PLoS Genet., 14,  e1007239  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29522508%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pgen.1007239|(full text)]] 
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 +Roman Zug, Peter Hammerstein, 2018, Evolution of reproductive parasites with direct fitness benefits. Heredity (Edinb), 120,  266-281  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29234159%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/s41437-017-0022-5|(full text)]] 
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 +Christopher T Monk, Matthieu Barbier, Pawel Romanczuk, James R Watson, Josep Alós, Shinnosuke Nakayama, Daniel I Rubenstein, Simon A Levin, Robert Arlinghaus, 2018, How ecology shapes exploitation: a framework to predict the behavioural response of human and animal foragers along exploration-exploitation trade-offs. Ecol. Lett., 21,  779-793  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29611278%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1111/ele.12949|(full text)]] 
 +
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 +Johannes Meisig, Nils Blüthgen, 2018, The gene regulatory network of mESC differentiation: a benchmark for reverse engineering methods. Philos. Trans. R. Soc. Lond., B, Biol. Sci., 373,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29786557%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1098/rstb.2017.0222|(full text)]] 
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 +Patricio Godoy, Wolfgang Schmidt-Heck, Birte Hellwig, Patrick Nell, David Feuerborn, Jörg Rahnenführer, Kathrin Kattler, Jörn Walter, Nils Blüthgen, Jan G Hengstler, 2018, Assessment of stem cell differentiation based on genome-wide expression profiles. Philos. Trans. R. Soc. Lond., B, Biol. Sci., 373,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29786556%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1098/rstb.2017.0221|(full text)]] 
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 +Marjan Faizi, Tomáš Zavrel, Cristina Loureiro, Jan Cerveny, Ralf Steuer, 2018, A model of optimal protein allocation during phototrophic growth. BioSystems, ,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29476802%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1016/j.biosystems.2018.02.004|(full text)]] 
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 +José R Donoso, Dietmar Schmitz, Nikolaus Maier, Richard Kempter, 2018, Hippocampal ripple oscillations and inhibition-first network models: Frequency dynamics and response to GABA modulators. J. Neurosci., ,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29453207%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1523/JNEUROSCI.0188-17.2018|(full text)]] 
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 +Christoph Schmal, Erik D Herzog, Hanspeter Herzel, 2018, Measuring Relative Coupling Strength in Circadian Systems. J. Biol. Rhythms, 33,  84-98  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29219034%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1177/0748730417740467|(full text)]] 
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 +Jihwan Myung, Christoph Schmal, Sungho Hong, Yoshiaki Tsukizawa, Pia Rose, Yong Zhang, Michael J Holtzman, Erik De Schutter, Hanspeter Herzel, Grigory Bordyugov, Toru Takumi, 2018, The choroid plexus is an important circadian clock component. Nat Commun, 9,  1062  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29540683%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/s41467-018-03507-2|(full text)]] 
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 +Michael Schubert, Bertram Klinger, Martina Klünemann, Anja Sieber, Florian Uhlitz, Sascha Sauer, Mathew J Garnett, Nils Blüthgen, Julio Saez-Rodriguez, 2018, Perturbation-response genes reveal signaling footprints in cancer gene expression. Nat Commun, 9,  20  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29295995%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/s41467-017-02391-6|(full text)]] 
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 +Ute Abraham, Julia Katharina Schlichting, Achim Kramer, Hanspeter Herzel, 2018, Quantitative analysis of circadian single cell oscillations in response to temperature. PLoS ONE, 13,  e0190004  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29293562%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pone.0190004|(full text)]] 
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 +Laura Cantini, Laurence Calzone, Loredana Martignetti, Mattias Rydenfelt, Nils Blüthgen, Emmanuel Barillot, Andrei Zinovyev, 2018, Classification of gene signatures for their information value and functional redundancy. NPJ Syst Biol Appl, 4,  2  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29263798%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/s41540-017-0038-8|(full text)]] 
 +
 +
 +=== 2017 ===
  
 Florian Uhlitz, Anja Sieber, Emanuel Wyler, Raphaela Fritsche-Guenther, Johannes Meisig, Markus Landthaler, Bertram Klinger, Nils Blüthgen, 2017, An immediate-late gene expression module decodes ERK signal duration. Mol. Syst. Biol., 13,  944  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28947433%5Buid%5D|(abstract)]]  Florian Uhlitz, Anja Sieber, Emanuel Wyler, Raphaela Fritsche-Guenther, Johannes Meisig, Markus Landthaler, Bertram Klinger, Nils Blüthgen, 2017, An immediate-late gene expression module decodes ERK signal duration. Mol. Syst. Biol., 13,  944  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28947433%5Buid%5D|(abstract)]] 
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 Thomas McColgan, Ji Liu, Paula Tuulia Kuokkanen, Catherine Emily Carr, Hermann Wagner, Richard Kempter, 2017, Dipolar extracellular potentials generated by axonal projections. Elife, 6,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28871959%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.7554/eLife.26106|(full text)]]  Thomas McColgan, Ji Liu, Paula Tuulia Kuokkanen, Catherine Emily Carr, Hermann Wagner, Richard Kempter, 2017, Dipolar extracellular potentials generated by axonal projections. Elife, 6,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28871959%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.7554/eLife.26106|(full text)]] 
- 
- 
-Alexandra-M Reimers, Henning Knoop, Alexander Bockmayr, Ralf Steuer, 2017, Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth. Proc. Natl. Acad. Sci. U.S.A., ,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28720699%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1073/pnas.1617508114|(full text)]]  
  
  
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-Janina HesseJan-Hendrik Schleimer, Susanne Schreiber, 2017, Qualitative changes in phase-response curve and synchronization at the saddle-node-loop bifurcationPhys Rev E95,  052203  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28618541%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1103/PhysRevE.95.052203|(full text)]] +Tiziano D'AlbisRichard Kempter, 2017, A single-cell spiking model for the origin of grid-cell patterns. PLoS Comput. Biol., 13,  e1005782  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28968386%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pcbi.1005782|(full text)]] 
  
  
-Guido HermeyNils BlüthgenDietmar Kuhl, 2017, Neuronal activity-regulated alternative mRNA splicing. Int. J. Biochem. Cell Biol., 91,  184-193  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28591617%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1016/j.biocel.2017.06.002|(full text)]] +Christoph SchmalJihwan MyungHanspeter Herzel, Grigory Bordyugov, 2017, Moran's I quantifies spatio-temporal pattern formation in neural imaging dataBioinformatics33,  3072-3079  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28575207%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1093/bioinformatics/btx351|(full text)]] 
  
  
-Christoph SchmalJihwan Myung, Hanspeter Herzel, Grigory Bordyugov, 2017, Moran's I quantifies spatio-temporal pattern formation in neural imaging dataBioinformatics33,  3072-3079  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28575207%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1093/bioinformatics/btx351|(full text)]] +Benjamin F MaierDirk Brockmann, 2017, Cover time for random walks on arbitrary complex networksPhys Rev E96,  042307  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29347543%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1103/PhysRevE.96.042307|(full text)]] 
  
  
-Lucas BöttcherOlivia Woolley-MezaDirk Brockmann, 2017, Temporal dynamics of online petitionsPLoS ONE12,  e0178062  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28542492%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pone.0178062|(full text)]] +Michael E HughesKatherine C Abruzzi, Ravi Allada, Ron Anafi, Alaaddin Bulak Arpat, Gad Asher, Pierre Baldi, Charissa de Bekker, Deborah Bell-PedersenJustin Blau, Steve Brown, M Fernanda Ceriani, Zheng Chen, Joanna C Chiu, Juergen Cox, Alexander M Crowell, Jason P DeBruyne, Derk-Jan Dijk, Luciano DiTacchio, Francis J Doyle, Giles E Duffield, Jay C Dunlap, Kristin Eckel-Mahan, Karyn A Esser, Garret A FitzGerald, Daniel B Forger, Lauren J Francey, Ying-Hui Fu, Frédéric Gachon, David Gatfield, Paul de Goede, Susan S Golden, Carla Green, John Harer, Stacey Harmer, Jeff Haspel, Michael H Hastings, Hanspeter Herzel, Erik D Herzog, Christy Hoffmann, Christian Hong, Jacob J Hughey, Jennifer M Hurley, Horacio O de la Iglesia, Carl Johnson, Steve A Kay, Nobuya Koike, Karl Kornacker, Achim Kramer, Katja Lamia, Tanya Leise, Scott A Lewis, Jiajia Li, Xiaodong Li, Andrew C Liu, Jennifer J Loros, Tami A Martino, Jerome S Menet, Martha Merrow, Andrew J Millar, Todd Mockler, Felix Naef, Emi Nagoshi, Michael N Nitabach, Maria Olmedo, Dmitri A Nusinow, Louis J Ptáček, David Rand, Akhilesh B Reddy, Maria S Robles, Till Roenneberg, Michael Rosbash, Marc D Ruben, Samuel S C Rund, Aziz Sancar, Paolo Sassone-Corsi, Amita Sehgal, Scott Sherrill-Mix, Debra J Skene, Kai-Florian Storch, Joseph S Takahashi, Hiroki R Ueda, Han Wang, Charles Weitz, Pål O Westermark, Herman Wijnen, Ying Xu, Gang Wu, Seung-Hee Yoo, Michael Young, Eric Erquan Zhang, Tomasz Zielinski, John B Hogenesch, 2017, Guidelines for Genome-Scale Analysis of Biological Rhythms. J. BiolRhythms32,  380-393  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=29098954%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1177/0748730417728663|(full text)]] 
  
  
-Marianne GründelHenning KnoopRalf Steuer, 2017, Activity and functional properties of the isocitrate lyase in the cyanobacterium Cyanothece spPCC 7424Microbiology (Reading, Engl.)163,  731-744  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28516845%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1099/mic.0.000459|(full text)]] +Guido HermeyNils BlüthgenDietmar Kuhl, 2017, Neuronal activity-regulated alternative mRNA splicingIntJ. Biochem. Cell Biol., 91,  184-193  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28591617%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1016/j.biocel.2017.06.002|(full text)]] 
  
  
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-Pamela RiemerMattias RydenfeltMatthias Marks, Karen van Eunen, Kathrin Thedieck, Bernhard G Herrmann, Nils Blüthgen, Christine Sers, Markus Morkel, 2017, Oncogenic β-catenin and PIK3CA instruct network states and cancer phenotypes in intestinal organoids. J. Cell Biol., 216,  1567-1577  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28442534%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1083/jcb.201610058|(full text)]] +Janina HesseJan-Hendrik SchleimerSusanne Schreiber, 2017, Qualitative changes in phase-response curve and synchronization at the saddle-node-loop bifurcationPhys Rev E95,  052203  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28618541%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1103/PhysRevE.95.052203|(full text)]] 
  
  
-Gregor MönkeElena CristianoAna Finzel, Dhana Friedrich, Hanspeter Herzel, Martin Falcke, Alexander Loewer, 2017, Excitability in the p53 network mediates robust signaling with tunable activation thresholds in single cellsSci Rep7,  46571  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28417973%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/srep46571|(full text)]] +Marianne GründelHenning KnoopRalf Steuer, 2017, Activity and functional properties of the isocitrate lyase in the cyanobacterium Cyanothece spPCC 7424. Microbiology (Reading, Engl.)163,  731-744  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28516845%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1099/mic.0.000459|(full text)]] 
  
  
-Jorge JaramilloRichard Kempter, 2017, Phase precession: a neural code underlying episodic memory? Curr. Opin. Neurobiol., 43,  130-138  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28390862%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1016/j.conb.2017.02.006|(full text)]] +Nils BlüthgenMirjam van Bentum, Barbara Merz, Dietmar Kuhl, Guido Hermey, 2017, Profiling the MAPK/ERK dependent and independent activity regulated transcriptional programs in the murine hippocampus in vivoSci Rep7,  45101  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28349920%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/srep45101|(full text)]] 
  
  
-Federica EduatiVictoria Doldàn-MartelliBertram KlingerThomas CokelaerAnja SieberFiona KogeraMathurin DorelMathew J GarnettNils BlüthgenJulio Saez-Rodriguez, 2017, Drug Resistance Mechanisms in Colorectal Cancer Dissected with Cell Type-Specific Dynamic Logic ModelsCancer Res., 77,  3364-3375  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28381545%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1158/0008-5472.CAN-17-0078|(full text)]] +Yinxiu ZhanLuca MarianiIros BarozziEdda G SchulzNils BlüthgenMichael StadlerGuido TianaLuca Giorgetti2017Reciprocal insulation analysis of Hi-C data shows that TADs represent a functionally but not structurally privileged scale in the hierarchical folding of chromosomesGenome Res., 27,  479-490  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28057745%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1101/gr.212803.116|(full text)]] 
  
  
-Nils BlüthgenMirjam van BentumBarbara MerzDietmar KuhlGuido Hermey, 2017, Profiling the MAPK/ERK dependent and independent activity regulated transcriptional programs in the murine hippocampus in vivoSci Rep7,  45101  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28349920%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1038/srep45101|(full text)]] +Federica EduatiVictoria Doldàn-MartelliBertram KlingerThomas Cokelaer, Anja Sieber, Fiona Kogera, Mathurin Dorel, Mathew J Garnett, Nils BlüthgenJulio Saez-Rodriguez, 2017, Drug Resistance Mechanisms in Colorectal Cancer Dissected with Cell Type-Specific Dynamic Logic Models. Cancer Res., 77,  3364-3375  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28381545%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1158/0008-5472.CAN-17-0078|(full text)]] 
  
  
-Flavio IannelliAndreas KoherDirk BrockmannPhilipp HövelIgor M Sokolov, 2017, Effective distances for epidemics spreading on complex networksPhys Rev E95,  012313  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28208446%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1103/PhysRevE.95.012313|(full text)]] +Pamela RiemerMattias RydenfeltMatthias MarksKaren van EunenKathrin Thedieck, Bernhard G Herrmann, Nils Blüthgen, Christine Sers, Markus Morkel, 2017, Oncogenic β-catenin and PIK3CA instruct network states and cancer phenotypes in intestinal organoids. J. Cell Biol., 216,  1567-1577  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28442534%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1083/jcb.201610058|(full text)]] 
  
  
-Kevin ThurleyChristopher HerbstFelix WesenerBarbara Koller, Thomas Wallach, Bert Maier, Achim Kramer, Pål O Westermark, 2017, Principles for circadian orchestration of metabolic pathways. Proc. Natl. Acad. Sci. U.S.A., 114 1572-1577  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28159888%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1073/pnas.1613103114|(full text)]] +Alexandra-M ReimersHenning KnoopAlexander BockmayrRalf Steuer, 2017, Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth. Proc. Natl. Acad. Sci. U.S.A., ,    [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28720699%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1073/pnas.1617508114|(full text)]] 
  
  
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-Martina MichalikovaMichiel W H RemmeRichard Kempter, 2017, Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS Comput. Biol., 13,  e1005237  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28068338%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pcbi.1005237|(full text)]] +Flavio IannelliAndreas KoherDirk Brockmann, Philipp Hövel, Igor M Sokolov, 2017, Effective distances for epidemics spreading on complex networksPhys Rev E95,  012313  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28208446%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1103/PhysRevE.95.012313|(full text)]] 
  
  
-Yinxiu ZhanLuca MarianiIros Barozzi, Edda G Schulz, Nils Blüthgen, Michael Stadler, Guido Tiana, Luca Giorgetti, 2017, Reciprocal insulation analysis of Hi-C data shows that TADs represent a functionally but not structurally privileged scale in the hierarchical folding of chromosomesGenome Res., 27,  479-490  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28057745%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1101/gr.212803.116|(full text)]] +Martina MichalikovaMichiel W H RemmeRichard Kempter, 2017, Spikelets in Pyramidal Neurons: Action Potentials Initiated in the Axon Initial Segment That Do Not Activate the Soma. PLoS ComputBiol., 13,  e1005237  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28068338%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1371/journal.pcbi.1005237|(full text)]] 
  
  
 David Malatinszky, Ralf Steuer, Patrik R Jones, 2017, A Comprehensively Curated Genome-Scale Two-Cell Model for the Heterocystous Cyanobacterium Anabaena sp. PCC 7120. Plant Physiol., 173,  509-523  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=27899536%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1104/pp.16.01487|(full text)]]  David Malatinszky, Ralf Steuer, Patrik R Jones, 2017, A Comprehensively Curated Genome-Scale Two-Cell Model for the Heterocystous Cyanobacterium Anabaena sp. PCC 7120. Plant Physiol., 173,  509-523  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=27899536%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1104/pp.16.01487|(full text)]] 
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 +Kevin Thurley, Christopher Herbst, Felix Wesener, Barbara Koller, Thomas Wallach, Bert Maier, Achim Kramer, Pål O Westermark, 2017, Principles for circadian orchestration of metabolic pathways. Proc. Natl. Acad. Sci. U.S.A., 114,  1572-1577  [[http://www.ncbi.nlm.nih.gov/pubmed/?term=28159888%5Buid%5D|(abstract)]]  [[http://dx.doi.org/10.1073/pnas.1613103114|(full text)]] 
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