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members:upadhyay:start [2020/03/18 21:39] – upadhyaymembers:upadhyay:start [2021/04/21 09:20] – upadhyay
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 ====Abhishek Upadhyay (Abhi) ==== ====Abhishek Upadhyay (Abhi) ====
-{{:members:upadhyay:abhiclock.jpg?200 |}}+{{:members:upadhyay:abhiclock.jpg?215 |}}
  
-**[[About]]**\\ 
-**Researcher ORCID**: [[https://orcid.org/0000-0003-0046-1168|https://orcid.org/0000-0003-0046-1168]] **Email**:   abhibiotechnologist@gmail.com ☎: +4930 2093 98410 \\ 
-Inter-multi-disciplinary researcher | Humour,Sports,Snow,Music,Nature-lover | Photography enthusiast \\ 
-\\ 
 **[[Education & Research experiences]]**\\ **[[Education & Research experiences]]**\\
-**Ph.D** in supervision @Charite & Humboldt University of Berlin (HU) & co-supervision @Heidelberg University, GERMANY\\+Postdoctoral fellow (Developmental Chronobiology) @ Friedrich Miescher Institute (FMI), Basel, SWITZERLAND 2021-\\
 \\ \\
-**Predoctoral fellow** @University of Witwatersrand (Wits), Johannesburg, SOUTH AFRICA\\ +**Ph.D (Chronobiology, Molecular Systems Biology)** 2016-20 \\  
-**M.Phil** @The University of Hong Kong (HKU), HONG KONG\\+**cumulative thesis**: **"Molecular switches facilitate rhythms in the circadian clock of //Neurospora crassa//"** in supervision @ Charite & Humboldt University of Berlin (HU) & co-supervision @ Heidelberg University, GERMANY\\
 \\ \\
-**Premasters fellow** @Indian Institute of Science (IISc), INDIA\\ +Predoctoral fellow (Evolutionary Biology) @ University of Witwatersrand (Wits), Johannesburg, SOUTH AFRICA\\
-**B.Engg** INDIA\\+
 \\ \\
 +**M.Phil (Marine Biology, Proteomics, Climate Change)** 2013-15 @ The University of Hong Kong (HKU), HONG KONG\\
 +\\
 +Premasters fellow @Indian Institute of Science (IISc), INDIA\\
 +\\
 +**B.Eng (Biotechnology Engineering)** 2008-12 , INDIA\\
 \\ \\
 //__**"Timing matters !"**__//  //__**"Timing matters !"**__// 
 +\\
 +\\
 +\\
 ===== THEORETICAL  CHRONOBIOLOGY  GROUP  MEETINGS  DIRECTORY ===== ===== THEORETICAL  CHRONOBIOLOGY  GROUP  MEETINGS  DIRECTORY =====
-[ Seminar of the __**Hanspeter Herzel Group**__ ([[https://scholar.google.com/citations?hl=en&user=4uT7ljsAAAAJ]] and https://itb.biologie.hu-berlin.de/wiki/groups/herzel/start). We meet every __**Tuesday at 14:45**__ in the Haus4 seminar room(s) of the ITB unless stated otherwise. Seminar list has previously been compiled by Christoph (https://itb.biologie.hu-berlin.de/~schmal/4_Seminar.html), however taken over by Abhi since 05.12.2017 ]\\ +[ Seminar of the __**Hanspeter Herzel Group**__ ([[https://scholar.google.com/citations?hl=en&user=4uT7ljsAAAAJ|Hanspeter_Scholar]] and [[https://itb.biologie.hu-berlin.de/wiki/groups/herzel/start|Hanspeter_Web]]). We met every __**Tuesday at 14:45**__ in the Haus4 seminar room(s) of the ITB unless stated otherwise. Seminar list was compiled by Abhi ([[https://medium.com/@abhiup01/how-a-switch-between-doing-science-and-playing-soccer-with-phd-supervisor-motivates-my-research-803a0bf5b1c6|Abhi_Medium]]) since 05.12.2017 until 30.07.2020]\\ 
-{{ :members:upadhyay:group_pic2.jpg?600 |}}{{:members:upadhyay:1.jpg?400|}}{{ :members:upadhyay:seasonal_rhythm_from_my_lab_window_berlin-1.jpg?400|}}\\+\\ 
 + 
 +{{:members:upadhyay:1.jpg?300 |}} {{:members:upadhyay:group_pic2.jpg?300|}}  
 +{{:members:upadhyay:herzel_group_virtual_pic_2020.jpg?300|}} {{ :members:upadhyay:seasonal_rhythm_from_my_lab_window_berlin-1.jpg?300|}} {{ :members:upadhyay:brunnergrouppic1.jpg?300|}} 
 +\\ 
 +\\ 
 +\\ 
 +\\ 
 +**28.07.2020 **\\ 
 +**Summer vacation**\\ 
 +\\ 
 +**14.07.2020 **\\ 
 +**Christoph**\\ 
 +Compensation Mechanisms in the Mammalian Circadian Clock  
 +\\ 
 +\\ 
 +**07.07.2020 **\\ 
 +**Stephanie**\\ 
 +East-West Asymmetry in Recovery from Jetlag  
 +\\ 
 +\\ 
 +**30.06.2020 **\\ 
 +**Rebekka**\\ 
 +Circadian Rhythms: Data Analysis and Mathematical Modelling  
 +\\ 
 +\\ 
 +**23.06.2020 **\\ 
 +**All**\\ 
 +SRBR2020 debriefing  
 +\\ 
 +\\ 
 +**16.06.2020 **\\ 
 +**Maria**\\ 
 +Human chronobiology in Sydney 
 +\\ 
 +\\ 
 +**09.06.2020 **\\ 
 +**Bharath**\\ 
 +Modeling the cockroach circadian clock 
 +\\ 
 +\\ 
 +**01.06.2020 - 03.06.2020 **\\ 
 +**SRBR 2020**\\ 
 +https://srbr.societyconference.com/v2/ 
 +\\ 
 +\\ 
 +**26.05.2020**\\ 
 +**Hanspeter**\\ 
 +Q&A session on basics of statistics-II 
 +\\ 
 +\\ 
 +**19.05.2020**\\ 
 +**Hanspeter**\\ 
 +Q&A session on basics of statistics-I 
 +\\ 
 +\\ 
 +**12.05.2020**\\ 
 +**Hanspeter**\\ 
 +The dynamic origin of genomic isochores 
 +\\ 
 +\\ 
 +**05.05.2020**\\ 
 +**Anna**\\ 
 +Peripheral circadian oscillators couple via exchange of paracrine signaling molecules, including TGF-β 
 +\\ 
 +\\ 
 +**28.04.2020**\\ 
 +**Nora**\\ 
 +Inferring signaling pathways activation from circadian time series using PROGENy 
 +\\ 
 +\\ 
 +**21.04.2020**\\ 
 +**Inge**\\ 
 +Nonlinear dynamics in models of the circadian clock 
 +\\ 
 +\\ 
 +**14.04.2020**\\ 
 +**Abhi**\\ 
 +Multiple random phosphorylations provide long delays and switches in //Neurospora// clock  
 +\\ 
 +\\ 
 +**07.04.2020**\\ 
 +**Marta**\\ 
 +Progress report on anna's manuscript: mechanisms of intercellular coupling among peripheral circadian oscillators 
 +\\ 
 +\\ 
 +**31.03.2020**\\ 
 +**Everyone**\\ 
 +Updates to Hanspeter\\ 
 +\\ 
 +\\ 
 +**Following COVID-19 guidelines we switched to "online virtual meetings (via ITB zulip jitsi and/or Zoom)" while working from home offices since 16.03.2020**\\ 
 +\\
 \\ \\
 **10.03.2020**\\ **10.03.2020**\\
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 **09.01.2018**\\ **09.01.2018**\\
 **Abhi**\\ **Abhi**\\
-Paper: DNA Replication Is Required for Circadian Clock Function by Regulating Rhythmic Nucleosome Composition [[https://www.ncbi.nlm.nih.gov/pubmed/28648778]].+Paper: DNA Replication Is Required for Circadian Clock Function by Regulating Rhythmic Nucleosome Composition
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 **14.11.2017**\\ **14.11.2017**\\
 **Abhishek**\\ **Abhishek**\\
-State of the art of project mathematical modleling of Neurospora circadian clock\\+State of the art of project mathematical modelling of //Neurospora// circadian clock\\
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 **30.05.2017**\\ **30.05.2017**\\
 **Abhishek**\\ **Abhishek**\\
-Paper: The frequency natural antisense transcript first promotes, then represses, frequency gene expression via facultative heterochromatin http://www.pnas.org/content/112/14/4357.long \\+Paper: The frequency natural antisense transcript first promotes, then represses, frequency gene expression via facultative heterochromatin \\
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 **07.03.2017**\\ **07.03.2017**\\
 **Isao Tokuda, Japan**\\ **Isao Tokuda, Japan**\\
-Variable entrainment property of Arabidopsis circadian clock by collective phase sensitivity\\+Variable entrainment property of //Arabidopsis// circadian clock by collective phase sensitivity\\
 \\ \\
  
 **28.02.2017**\\ **28.02.2017**\\
 **Abhishek**\\ **Abhishek**\\
-Neurospora crassa: introduction of its biology, circadian clock & mathematical models\\+//Neurospora crassa//: introduction of its biology, circadian clock & mathematical models\\
 \\ \\