Bharath, Ananthasubramaniam Hanspeter, Herzel 2014, Positive feedback promotes oscillations in negative feedback loops. PLoS ONE, 9, e104761 (full text)

Bertram, Klinger Nils, Blüthgen 2014, Consequences of feedback in signal transduction for targeted therapies. Biochem. Soc. Trans., 42, 770-5 (full text)

Robert, Lehmann Rainer, Machné Hanspeter, Herzel 2014, The structural code of cyanobacterial genomes. Nucleic Acids Res., 42, 8873-83 (full text)

Anja, Korenčič Rok, Košir Grigory, Bordyugov Robert, Lehmann Damjana, Rozman Hanspeter, Herzel 2014, Timing of circadian genes in mammalian tissues. Sci Rep, 4, 5782 (full text)

Eric, Reifenstein Martin, Stemmler Andreas V M, Herz Richard, Kempter Susanne, Schreiber 2014, Movement dependence and layer specificity of entorhinal phase precession in two-dimensional environments. PLoS ONE, 9, e100638 (full text)

Christian, Beck Stefanie, Hertel Anne, Rediger Robert, Lehmann Anika, Wiegard Adrian, Kölsch Beate, Heilmann Jens, Georg Wolfgang R, Hess Ilka M, Axmann 2014, Daily Expression Pattern of Protein-Encoding Genes and Small Noncoding RNAs in Synechocystis sp. Strain PCC 6803. Appl. Environ. Microbiol., 80, 5195-206 (full text)

Monica, Killig Birte, Friedrichs Johannes, Meisig Chiara, Gentilini Nils, Blüthgen Christoph, Loddenkemper Myriam, Labopin Nadezda, Basara Christian, Pfrepper Dietger W, Niederwieser Lutz, Uharek Chiara, Romagnani 2014, Tracking in vivo dynamics of NK cells transferred in patients undergoing stem cell transplantation. Eur. J. Immunol., , (full text)

Angela, Relógio Philippe, Thomas Paula, Medina-Pérez Silke, Reischl Sander, Bervoets Ewa, Gloc Pamela, Riemer Shila, Mang-Fatehi Bert, Maier Reinhold, Schäfer Ulf, Leser Hanspeter, Herzel Achim, Kramer Christine, Sers 2014, Ras-mediated deregulation of the circadian clock in cancer. PLoS Genet., 10, e1004338 (full text)

Jorge, Jaramillo Robert, Schmidt Richard, Kempter 2014, Modeling inheritance of phase precession in the hippocampal formation. J. Neurosci., 34, 7715-31 (full text)

Frederic A, Roemschied Monika Jb, Eberhard Jan-Hendrik, Schleimer Bernhard, Ronacher Susanne, Schreiber 2014, Cell-intrinsic mechanisms of temperature compensation in a grasshopper sensory receptor neuron. Elife, 3, e02078 (full text)

Arndt, Telschow Kirsten, Hilgenboecker Peter, Hammerstein John H, Werren 2014, Dobzhansky-muller and wolbachia-induced incompatibilities in a diploid genetic system. PLoS ONE, 9, e95488 (full text)

Bharath, Ananthasubramaniam Erik D, Herzog Hanspeter, Herzel 2014, Timing of neuropeptide coupling determines synchrony and entrainment in the mammalian circadian clock. PLoS Comput. Biol., 10, e1003565 (full text)

Ana C L, Guerreiro Marco, Benevento Robert, Lehmann Bas, van Breukelen Harm, Post Piero, Giansanti A F, Maarten Altelaar Ilka M, Axmann Albert J R, Heck 2014, Daily Rhythms in the Cyanobacterium Synechococcus elongatus Probed by High-resolution Mass Spectrometry-based Proteomics Reveals a Small Defined Set of Cyclic Proteins. Mol. Cell Proteomics, 13, 2042-55 (full text)

Roman, Zug Peter, Hammerstein 2014, Bad guys turned nice? A critical assessment of Wolbachia mutualisms in arthropod hosts. Biol Rev Camb Philos Soc, , (full text)

Edda G, Schulz Johannes, Meisig Tomonori, Nakamura Ikuhiro, Okamoto Anja, Sieber Christel, Picard Maud, Borensztein Mitinori, Saitou Nils, Blüthgen Edith, Heard 2014, The two active X chromosomes in female ESCs block exit from the pluripotent state by modulating the ESC signaling network. Cell Stem Cell, 14, 203-16 (full text)

Joost, Snijder Rebecca J, Burnley Anika, Wiegard Adrien S J, Melquiond Alexandre M J J, Bonvin Ilka M, Axmann Albert J R, Heck 2014, Insight into cyanobacterial circadian timing from structural details of the KaiB-KaiC interaction. Proc. Natl. Acad. Sci. U.S.A., 111, 1379-84 (full text)

Gijsbert D A, Werner Joan E, Strassmann Aniek B F, Ivens Daniel J P, Engelmoer Erik, Verbruggen David C, Queller Ronald, Noë Nancy Collins, Johnson Peter, Hammerstein E Toby, Kiers 2014, Evolution of microbial markets. Proc. Natl. Acad. Sci. U.S.A., 111, 1237-44 (full text)

Willi, Gottstein Stefan, Müller Hanspeter, Herzel Ralf, Steuer 2014, Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution. BioSystems, 117, 68-76 (full text)

Ilka M, Axmann Stefanie, Hertel Anika, Wiegard Anja K, Dörrich Annegret, Wilde 2014, Diversity of KaiC-based timing systems in marine Cyanobacteria. Mar Genomics, 14, 3-16 (full text)

Stefan, Müller Georg, Regensburger Ralf, Steuer 2014, Enzyme allocation problems in kinetic metabolic networks: optimal solutions are elementary flux modes. J. Theor. Biol., 347, 182-90 (full text)

Stefan, Müller Georg, Regensburger Ralf, Steuer 2014, Enzyme allocation problems in kinetic metabolic networks: optimal solutions are elementary flux modes. J. Theor. Biol., 347, 182-90 (full text)

Ekaterina, Zhuchkova Michiel W H, Remme Susanne, Schreiber 2013, Somatic versus dendritic resonance: differential filtering of inputs through non-uniform distributions of active conductances. PLoS ONE, 8, e78908 (full text)

Stefanie, Hertel Reimo, Zoschke Laura, Neumann Yujiao, Qu Ilka M, Axmann Christian, Schmitz-Linneweber 2013, Multiple checkpoints for the expression of the chloroplast-encoded splicing factor MatK. Plant Physiol., 163, 1686-98 (full text)

Guido, Hermey Claudia, Mahlke Jakob J, Gutzmann Jörg, Schreiber Nils, Blüthgen Dietmar, Kuhl 2013, Genome-wide profiling of the activity-dependent hippocampal transcriptome. PLoS ONE, 8, e76903 (full text)

Henning, Knoop Marianne, Gründel Yvonne, Zilliges Robert, Lehmann Sabrina, Hoffmann Wolfgang, Lockau Ralf, Steuer 2013, Flux balance analysis of cyanobacterial metabolism: the metabolic network of Synechocystis sp. PCC 6803. PLoS Comput. Biol., 9, e1003081 (full text)

Timor, Glatzer Monica, Killig Johannes, Meisig Isabelle, Ommert Merlin, Luetke-Eversloh Marina, Babic Daniela, Paclik Nils, Blüthgen Rainer, Seidl Claudia, Seifarth Jörn, Gröne Minoo, Lenarz Katharina, Stölzel Dominik, Fugmann Angel, Porgador Anja, Hauser Alexander, Karlas Chiara, Romagnani 2013, RORγt⁺ innate lymphoid cells acquire a proinflammatory program upon engagement of the activating receptor NKp44. Immunity, 38, 1223-35 (full text)

Kajetan, Bentele Paul, Saffert Robert, Rauscher Zoya, Ignatova Nils, Blüthgen 2013, Efficient translation initiation dictates codon usage at gene start. Mol. Syst. Biol., 9, 675 (full text)

Bertram, Klinger Anja, Sieber Raphaela, Fritsche-Guenther Franziska, Witzel Leanne, Berry Dirk, Schumacher Yibing, Yan Pawel, Durek Mark, Merchant Reinhold, Schäfer Christine, Sers Nils, Blüthgen 2013, Network quantification of EGFR signaling unveils potential for targeted combination therapy. Mol. Syst. Biol., 9, 673 (full text)

Catherine, Carr Sahil, Shah Go, Ashida Thomas, McColgan Hermann, Wagner Paula T, Kuokkanen Richard, Kempter Christine, Köppl 2013, Maps of ITD in the nucleus laminaris of the barn owl. Adv. Exp. Med. Biol., 787, 215-22 (full text)

Christian T, Herbst Hanspeter, Herzel Jan G, Svec Megan T, Wyman W Tecumseh, Fitch 2013, Visualization of system dynamics using phasegrams. J R Soc Interface, 10, 20130288 (full text)

Robert, Lehmann Rainer, Machné Jens, Georg Manuela, Benary Ilka, Axmann Ralf, Steuer 2013, How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis. BMC Bioinformatics, 14, 133 (full text)

Pål O, Westermark Hanspeter, Herzel 2013, Mechanism for 12 hr rhythm generation by the circadian clock. Cell Rep, 3, 1228-38 (full text)

Paula T, Kuokkanen Go, Ashida Catherine E, Carr Hermann, Wagner Richard, Kempter 2013, Linear summation in the barn owl's brainstem underlies responses to interaural time differences. J. Neurophysiol., 110, 117-30 (full text)

Adrián E, Granada Grigory, Bordyugov Achim, Kramer Hanspeter, Herzel 2013, Human chronotypes from a theoretical perspective. PLoS ONE, 8, e59464 (full text)

Stefanie, Hertel Christian, Brettschneider Ilka M, Axmann 2013, Revealing a two-loop transcriptional feedback mechanism in the cyanobacterial circadian clock. PLoS Comput. Biol., 9, e1002966 (full text)

Anika, Wiegard Anja K, Dörrich Hans-Tobias, Deinzer Christian, Beck Annegret, Wilde Julia, Holtzendorff Ilka M, Axmann 2013, Biochemical analysis of three putative KaiC clock proteins from Synechocystis sp. PCC 6803 suggests their functional divergence. Microbiology (Reading, Engl.), 159, 948-58 (full text)

Maria, Pangalos José R, Donoso Jochen, Winterer Aleksandar R, Zivkovic Richard, Kempter Nikolaus, Maier Dietmar, Schmitz 2013, Recruitment of oriens-lacunosum-moleculare interneurons during hippocampal ripples. Proc. Natl. Acad. Sci. U.S.A., 110, 4398-403 (full text)

Benjamin, Bossan Peter, Hammerstein Arnulf, Koehncke 2013, We were all young once: an intragenomic perspective on parent-offspring conflict. Proc. Biol. Sci., 280, 20122637 (full text)

Nils, Blüthgen Stefan, Legewie 2013, Robustness of signal transduction pathways. Cell. Mol. Life Sci., 70, 2259-69 (full text)

Franziska, Witzel Louise, Maddison Nils, Blüthgen 2012, How scaffolds shape MAPK signaling: what we know and opportunities for systems approaches. Front Physiol, 3, 475 (full text)

Anja, Korenčič Grigory, Bordyugov Rok, Košir Damjana, Rozman Marko, Goličnik Hanspeter, Herzel 2012, The interplay of cis-regulatory elements rules circadian rhythms in mouse liver. PLoS ONE, 7, e46835 (full text)

Nils, Blüthgen Stefan, Legewie 2013, Robustness of signal transduction pathways. Cell. Mol. Life Sci., 70, 2259-69 (full text)

Dmitry, Zarubin Ekaterina, Zhuchkova Susanne, Schreiber 2012, Effects of cooperative ion-channel interactions on the dynamics of excitable membranes. Phys Rev E Stat Nonlin Soft Matter Phys, 85, 061904 (full text)

Hanna, Bendfeldt Manuela, Benary Tobias, Scheel Kerstin, Steinbrink Andreas, Radbruch Hanspeter, Herzel Ria, Baumgrass 2012, IL-2 Expression in Activated Human Memory FOXP3(+) Cells Critically Depends on the Cellular Levels of FOXP3 as Well as of Four Transcription Factors of  T Cell Activation. Front Immunol, 3, 264 (full text)

Jari, Kämäräinen Henning, Knoop Natalie J, Stanford Fernando, Guerrero M Kalim, Akhtar Eva-Mari, Aro Ralf, Steuer Patrik R, Jones 2012, Physiological tolerance and stoichiometric potential of cyanobacteria for hydrocarbon fuel production. J. Biotechnol., 162, 67-74 (full text)

Go, Ashida Kazuo, Funabiki Paula T, Kuokkanen Richard, Kempter Catherine E, Carr 2012, Signal-to-noise ratio in the membrane potential of the owl's auditory coincidence detectors. J. Neurophysiol., 108, 2837-45 (full text)

Jörn Matthias, Schmiedel Ilka Maria, Axmann Stefan, Legewie 2012, Multi-target regulation by small RNAs synchronizes gene expression thresholds and may enhance ultrasensitive behavior. PLoS ONE, 7, e42296 (full text)

Michael, Fähling Anja Bondke, Persson Bertram, Klinger Edgar, Benko Andreas, Steege Mumtaz, Kasim Andreas, Patzak Pontus B, Persson Gunter, Wolf Nils, Blüthgen Ralf, Mrowka 2012, Multilevel regulation of HIF-1 signaling by TTP. Mol. Biol. Cell, 23, 4129-41 (full text)

Iwona, Stelniec-Klotz Stefan, Legewie Oleg, Tchernitsa Franziska, Witzel Bertram, Klinger Christine, Sers Hanspeter, Herzel Nils, Blüthgen Reinhold, Schäfer 2012, Reverse engineering a hierarchical regulatory network downstream of oncogenic KRAS. Mol. Syst. Biol., 8, 601 (full text)

Anne, Rediger René, Geissen Benedikt, Steuten Beate, Heilmann Rolf, Wagner Ilka M, Axmann 2012, 6S RNA - an old issue became blue-green. Microbiology (Reading, Engl.), 158, 2480-91 (full text)

Roman, Zug Peter, Hammerstein 2012, Still a host of hosts for Wolbachia: analysis of recent data suggests that 40% of terrestrial arthropod species are infected. PLoS ONE, 7, e38544 (full text)

Roland, Schaette Richard, Kempter 2012, Computational models of neurophysiological correlates of tinnitus. Front Syst Neurosci, 6, 34 (full text)

Elphège P, Nora Bryan R, Lajoie Edda G, Schulz Luca, Giorgetti Ikuhiro, Okamoto Nicolas, Servant Tristan, Piolot Nynke L, van Berkum Johannes, Meisig John, Sedat Joost, Gribnau Emmanuel, Barillot Nils, Blüthgen Job, Dekker Edith, Heard 2012, Spatial partitioning of the regulatory landscape of the X-inactivation centre. Nature, 485, 381-5 (full text)

Richard, Kempter Christian, Leibold György, Buzsáki Kamran, Diba Robert, Schmidt 2012, Quantifying circular-linear associations: hippocampal phase precession. J. Neurosci. Methods, 207, 113-24 (full text)

Eric T, Reifenstein Richard, Kempter Susanne, Schreiber Martin B, Stemmler Andreas V M, Herz 2012, Grid cells in rat entorhinal cortex encode physical space with independent firing fields and phase precession at the single-trial level. Proc. Natl. Acad. Sci. U.S.A., 109, 6301-6 (full text)

Hanna, Bendfeldt Manuela, Benary Tobias, Scheel Stefan, Frischbutter Anna, Abajyan Andreas, Radbruch Hanspeter, Herzel Ria, Baumgrass 2012, Stable IL-2 decision making by endogenous c-Fos amounts in peripheral memory T-helper cells. J. Biol. Chem., 287, 18386-97 (full text)

Ralf, Steuer Henning, Knoop Rainer, Machné 2012, Modelling cyanobacteria: from metabolism to integrative models of phototrophic growth. J. Exp. Bot., 63, 2259-74 (full text)

Christian, Beck Henning, Knoop Ilka M, Axmann Ralf, Steuer 2012, The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms. BMC Genomics, 13, 56 (full text)

Mariano A, Belluscio Kenji, Mizuseki Robert, Schmidt Richard, Kempter György, Buzsáki 2012, Cross-frequency phase-phase coupling between θ and γ oscillations in the hippocampus. J. Neurosci., 32, 423-35 (full text)

Adrián E, Granada Trinitat, Cambras Antoni, Díez-Noguera Hanspeter, Herzel 2011, Circadian desynchronization. Interface Focus, 1, 153-66 (full text)

Ralf, Steuer Steffen, Waldherr Victor, Sourjik Markus, Kollmann 2011, Robust signal processing in living cells. PLoS Comput. Biol., 7, e1002218 (full text)

Angela, Relógio Pal O, Westermark Thomas, Wallach Katja, Schellenberg Achim, Kramer Hanspeter, Herzel 2011, Tuning the mammalian circadian clock: robust synergy of two loops. PLoS Comput. Biol., 7, e1002309 (full text)

Nikolaus, Maier Alvaro, Tejero-Cantero Anja L, Dorrn Jochen, Winterer Prateep S, Beed Genela, Morris Richard, Kempter James F A, Poulet Christian, Leibold Dietmar, Schmitz 2011, Coherent phasic excitation during hippocampal ripples. Neuron, 72, 137-52 (full text)

Pascal, Schulthess Nils, Blüthgen 2011, From reaction networks to information flow–using modular response analysis to track information in signaling networks. Meth. Enzymol., 500, 397-409 (full text)

Jan, Clemens Olaf, Kutzki Bernhard, Ronacher Susanne, Schreiber Sandra, Wohlgemuth 2011, Efficient transformation of an auditory population code in a small sensory system. Proc. Natl. Acad. Sci. U.S.A., 108, 13812-7 (full text)

K Laurence, Jost Sebastian, Haase Daniel, Smeets Nadine, Schrode Jörn M, Schmiedel Bianca, Bertulat Hanspeter, Herzel Marion, Cremer M Cristina, Cardoso 2011, 3D-Image analysis platform monitoring relocation of pluripotency genes during reprogramming. Nucleic Acids Res., 39, e113 (full text)

Anuradha, Chauhan Stephan, Lorenzen Hanspeter, Herzel Samuel, Bernard 2011, Regulation of mammalian cell cycle progression in the regenerating liver. J. Theor. Biol., 283, 103-12 (full text)

Raphaela, Fritsche-Guenther Franziska, Witzel Anja, Sieber Ricarda, Herr Nadine, Schmidt Sandra, Braun Tilman, Brummer Christine, Sers Nils, Blüthgen 2011, Strong negative feedback from Erk to Raf confers robustness to MAPK signalling. Mol. Syst. Biol., 7, 489 (full text)

Benjamin, Bossan Arnulf, Koehncke Peter, Hammerstein 2011, A new model and method for understanding Wolbachia-induced cytoplasmic incompatibility. PLoS ONE, 6, e19757 (full text)

Christian, Klotz Thomas, Ziegler Ana Sofia, Figueiredo Sebastian, Rausch Matthew R, Hepworth Nadja, Obsivac Christine, Sers Roland, Lang Peter, Hammerstein Richard, Lucius Susanne, Hartmann 2011, A helminth immunomodulator exploits host signaling events to regulate cytokine production in macrophages. PLoS Pathog., 7, e1001248 (full text)

Marc, Päpper Richard, Kempter Christian, Leibold 2011, Synaptic tagging, evaluation of memories, and the distal reward problem. Learn. Mem., 18, 58-70 (full text)

Ettore, Murabito Kieran, Smallbone Jonathan, Swinton Hans V, Westerhoff Ralf, Steuer 2011, A probabilistic approach to identify putative drug targets in biochemical networks. J R Soc Interface, 8, 880-95 (full text)

Adrián E, Granada Trinitat, Cambras Antoni, Díez-Noguera Hanspeter, Herzel 2011, Circadian desynchronization. Interface Focus, 1, 153-66 (full text)

Marc, Päpper Richard, Kempter Christian, Leibold 2011, Synaptic tagging, evaluation of memories, and the distal reward problem. Learn. Mem., 18, 58-70 (full text)

Karsten, Jürchott Ralf-Jürgen, Kuban Till, Krech Nils, Blüthgen Ulrike, Stein Wolfgang, Walther Christian, Friese Szymon M, Kiełbasa Ute, Ungethüm Per, Lund Thomas, Knösel Wolfgang, Kemmner Markus, Morkel Johannes, Fritzmann Peter M, Schlag Walter, Birchmeier Tammo, Krueger Silke, Sperling Christine, Sers Hans-Dieter, Royer Hanspeter, Herzel Reinhold, Schäfer 2010, Identification of Y-box binding protein 1 as a core regulator of MEK/ERK pathway-dependent gene signatures in colorectal cancer cells. PLoS Genet., 6, e1001231 (full text)

Ettore, Murabito Kieran, Smallbone Jonathan, Swinton Hans V, Westerhoff Ralf, Steuer 2011, A probabilistic approach to identify putative drug targets in biochemical networks. J R Soc Interface, 8, 880-95 (full text)

Ute, Abraham Adrián E, Granada Pål O, Westermark Markus, Heine Achim, Kramer Hanspeter, Herzel 2010, Coupling governs entrainment range of circadian clocks. Mol. Syst. Biol., 6, 438 (full text)

Paula T, Kuokkanen Hermann, Wagner Go, Ashida Catherine E, Carr Richard, Kempter 2010, On the origin of the extracellular field potential in the nucleus laminaris of the barn owl (Tyto alba). J. Neurophysiol., 104, 2274-90 (full text)

Olof, Leimar Peter, Hammerstein 2010, Cooperation for direct fitness benefits. Philos. Trans. R. Soc. Lond., B, Biol. Sci., 365, 2619-26 (full text)

Christian, Brettschneider Rebecca J, Rose Stefanie, Hertel Ilka M, Axmann Albert J R, Heck Markus, Kollmann 2010, A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock. Mol. Syst. Biol., 6, 389 (full text)

Roland, Schaette Ovidiu, König Dirk, Hornig Manfred, Gross Richard, Kempter 2010, Acoustic stimulation treatments against tinnitus could be most effective when tinnitus pitch is within the stimulated frequency range. Hear. Res., 269, 95-101 (full text)

Henning, Knoop Yvonne, Zilliges Wolfgang, Lockau Ralf, Steuer 2010, The metabolic network of Synechocystis sp. PCC 6803: systemic properties of autotrophic growth. Plant Physiol., 154, 410-22 (full text)

Szymon M, Kiełbasa Holger, Klein Helge G, Roider Martin, Vingron Nils, Blüthgen 2010, TransFind–predicting transcriptional regulators for gene sets. Nucleic Acids Res., 38, W275-80 (full text)

Jignesh R, Parikh Bertram, Klinger Yu, Xia Jarrod A, Marto Nils, Blüthgen 2010, Discovering causal signaling pathways through gene-expression patterns. Nucleic Acids Res., 38, W109-17 (full text)

Szymon M, Kiełbasa Nils, Blüthgen Michael, Fähling Ralf, Mrowka 2010, Targetfinder.org: a resource for systematic discovery of transcription factor target genes. Nucleic Acids Res., 38, W233-8 (full text)

Nils, Blüthgen 2010, Transcriptional feedbacks in mammalian signal transduction pathways facilitate rapid and reliable protein induction. Mol Biosyst, 6, 1277-84 (full text)

Samuel, Bernard Branka, Cajavec Bernard Francis, Lévi Hanspeter, Herzel 2010, Tumor growth rate determines the timing of optimal chronomodulated treatment schedules. PLoS Comput. Biol., 6, e1000712 (full text)

Isao T, Tokuda Marco, Zemke Malte, Kob Hanspeter, Herzel 2010, Biomechanical modeling of register transitions and the role of vocal tract resonators. J. Acoust. Soc. Am., 127, 1528-36 (full text)

Yue-Hien, Lee Manuela, Benary Ria, Baumgrass Hanspeter, Herzel 2010, Prediction of regulatory transcription factors in T helper cell differentiation and maintenance. Genome Inform, 22, 84-94 (full text)

Olaf, Wolkenhauer Charles, Auffray Simone, Baltrusch Nils, Blüthgen Helen, Byrne Marta, Cascante Andrea, Ciliberto Trevor, Dale Dirk, Drasdo David, Fell James E, Ferrell Daniel, Gallahan Robert, Gatenby Ulrich, Günther Brian D, Harms Hanspeter, Herzel Christian, Junghanss Manfred, Kunz Ingeborg, van Leeuwen Philippe, Lenormand Francis, Levi Michael, Linnebacher John, Lowengrub Philip K, Maini Arif, Malik Katja, Rateitschak Owen, Sansom Reinhold, Schäfer Karsten, Schürrle Christine, Sers Santiago, Schnell Darryl, Shibata John, Tyson Julio, Vera Michael, White Boris, Zhivotovsky Robert, Jaster 2010, Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Res., 70, 12-3 (full text)

Erik, Arner Pål O, Westermark Kirsty L, Spalding Tom, Britton Mikael, Rydén Jonas, Frisén Samuel, Bernard Peter, Arner 2010, Adipocyte turnover: relevance to human adipose tissue morphology. Diabetes, 59, 105-9 (full text)

Olaf, Wolkenhauer Charles, Auffray Simone, Baltrusch Nils, Blüthgen Helen, Byrne Marta, Cascante Andrea, Ciliberto Trevor, Dale Dirk, Drasdo David, Fell James E, Ferrell Daniel, Gallahan Robert, Gatenby Ulrich, Günther Brian D, Harms Hanspeter, Herzel Christian, Junghanss Manfred, Kunz Ingeborg, van Leeuwen Philippe, Lenormand Francis, Levi Michael, Linnebacher John, Lowengrub Philip K, Maini Arif, Malik Katja, Rateitschak Owen, Sansom Reinhold, Schäfer Karsten, Schürrle Christine, Sers Santiago, Schnell Darryl, Shibata John, Tyson Julio, Vera Michael, White Boris, Zhivotovsky Robert, Jaster 2010, Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Res., 70, 12-3 (full text)

Pål O, Westermark David K, Welsh Hitoshi, Okamura Hanspeter, Herzel 2009, Quantification of circadian rhythms in single cells. PLoS Comput. Biol., 5, e1000580 (full text)

Erik, Arner Pål O, Westermark Kirsty L, Spalding Tom, Britton Mikael, Rydén Jonas, Frisén Samuel, Bernard Peter, Arner 2010, Adipocyte turnover: relevance to human adipose tissue morphology. Diabetes, 59, 105-9 (full text)

Robert, Schmidt Kamran, Diba Christian, Leibold Dietmar, Schmitz György, Buzsáki Richard, Kempter 2009, Single-trial phase precession in the hippocampus. J. Neurosci., 29, 13232-41 (full text)

Adrián E, Granada Hanspeter, Herzel 2009, How to achieve fast entrainment? The timescale to synchronization. PLoS ONE, 4, e7057 (full text)

Frank J, Bruggeman Nils, Blüthgen Hans V, Westerhoff 2009, Noise management by molecular networks. PLoS Comput. Biol., 5, e1000506 (full text)

Hermann, Wagner Sandra, Brill Richard, Kempter Catherine E, Carr 2009, Auditory responses in the barn owl's nucleus laminaris to clicks: impulse response and signal analysis of neurophonic potential. J. Neurophysiol., 102, 1227-40 (full text)

Judith, Dannowski Matthias, Flor Arndt, Telschow Peter, Hammerstein 2009, The effect of sibmating on the infection dynamics of male-killing bacteria. Evolution, 63, 2525-34 (full text)

Ilka M, Axmann Ulf, Dühring Luiza, Seeliger Anne, Arnold Jens T, Vanselow Achim, Kramer Annegret, Wilde 2009, Biochemical evidence for a timing mechanism in prochlorococcus. J. Bacteriol., 191, 5342-7 (full text)

Ana Sofia, Figueiredo Thomas, Höfer Christian, Klotz Christine, Sers Susanne, Hartmann Richard, Lucius Peter, Hammerstein 2009, Modelling and simulating interleukin-10 production and regulation by macrophages after stimulation with an immunomodulator of parasitic nematodes. FEBS J., 276, 3454-69 (full text)

Roland, Schaette Richard, Kempter 2009, Predicting tinnitus pitch from patients' audiograms with a computational model for the development of neuronal hyperactivity. J. Neurophysiol., 101, 3042-52 (full text)

Katarzyna, Bozek Angela, Relógio Szymon M, Kielbasa Markus, Heine Christof, Dame Achim, Kramer Hanspeter, Herzel 2009, Regulation of clock-controlled genes in mammals. PLoS ONE, 4, e4882 (full text)

Arnulf, Koehncke Arndt, Telschow John H, Werren Peter, Hammerstein 2009, Life and death of an influential passenger: Wolbachia and the evolution of CI-modifiers by their hosts. PLoS ONE, 4, e4425 (full text)

Susanne, Schreiber Inés, Samengo Andreas V M, Herz 2009, Two distinct mechanisms shape the reliability of neural responses. J. Neurophysiol., 101, 2239-51 (full text)

Nils, Blüthgen Stefan, Legewie Szymon M, Kielbasa Anja, Schramme Oleg, Tchernitsa Jana, Keil Andrea, Solf Martin, Vingron Reinhold, Schäfer Hanspeter, Herzel Christine, Sers 2009, A systems biological approach suggests that transcriptional feedback regulation by dual-specificity phosphatase 6 shapes extracellular signal-related kinase activity in RAS-transformed fibroblasts. FEBS J., 276, 1024-35 (full text)

Sonja-Verena, Albers Nils-Kåre, Birkeland Arnold J M, Driessen Susanne, Gertig Patrick, Haferkamp Hans-Peter, Klenk Theresa, Kouril Andrea, Manica Trong K, Pham Peter, Ruoff Christa, Schleper Dietmar, Schomburg Kieran J, Sharkey Bettina, Siebers Pawel, Sierocinski Ralf, Steuer John, van der Oost Hans V, Westerhoff Patricia, Wieloch Phillip C, Wright Melanie, Zaparty 2009, SulfoSYS (Sulfolobus Systems Biology): towards a silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature variation. Biochem. Soc. Trans., 37, 58-64 (full text)

Stefan, Legewie Christine, Sers Hanspeter, Herzel 2009, Kinetic mechanisms for overexpression insensitivity and oncogene cooperation. FEBS Lett., 583, 93-6 (full text)

Stefan, Legewie Christine, Sers Hanspeter, Herzel 2009, Kinetic mechanisms for overexpression insensitivity and oncogene cooperation. FEBS Lett., 583, 93-6 (full text)

Markus J, Herrgård Neil, Swainston Paul, Dobson Warwick B, Dunn K Yalçin, Arga Mikko, Arvas Nils, Blüthgen Simon, Borger Roeland, Costenoble Matthias, Heinemann Michael, Hucka Nicolas, Le Novère Peter, Li Wolfram, Liebermeister Monica L, Mo Ana Paula, Oliveira Dina, Petranovic Stephen, Pettifer Evangelos, Simeonidis Kieran, Smallbone Irena, Spasić Dieter, Weichart Roger, Brent David S, Broomhead Hans V, Westerhoff Betül, Kirdar Merja, Penttilä Edda, Klipp Bernhard Ø, Palsson Uwe, Sauer Stephen G, Oliver Pedro, Mendes Jens, Nielsen Douglas B, Kell 2008, A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nat. Biotechnol., 26, 1155-60 (full text)

Nils, Blüthgen Stefan, Legewie 2008, Systems analysis of MAPK signal transduction. Essays Biochem., 45, 95-107 (full text)

Annamaria, Bevilacqua Stephen J, Wilkinson Richard, Dimelow Ettore, Murabito Samrina, Rehman Maria, Nardelli Karen, van Eunen Sergio, Rossell Frank J, Bruggeman Nils, Blüthgen Dirk, De Vos Jildau, Bouwman Barbara M, Bakker Hans V, Westerhoff 2008, Vertical systems biology: from DNA to flux and back. SEB Exp Biol Ser, 61, 65-91 (full text)

Hanspeter, Herzel Nils, Blüthgen 2008, Mathematical models in mammalian cell biology. Genome Biol., 9, 316 (full text)

Stefan, Legewie Dennis, Dienst Annegret, Wilde Hanspeter, Herzel Ilka M, Axmann 2008, Small RNAs establish delays and temporal thresholds in gene expression. Biophys. J., 95, 3232-8 (full text)

Yutaka, Kobayashi Peter, Hammerstein Arndt, Telschow 2008, The neutral effective migration rate in a mainland-island context. Theor Popul Biol, 74, 84-92 (full text)

Ralf, Mrowka Nils, Blüthgen Michael, Fähling 2008, Seed-based systematic discovery of specific transcription factor target genes. FEBS J., 275, 3178-92 (full text)

Stefan, Legewie Hanspeter, Herzel Hans V, Westerhoff Nils, Blüthgen 2008, Recurrent design patterns in the feedback regulation of the mammalian signalling network. Mol. Syst. Biol., 4, 190 (full text)

Kirsty L, Spalding Erik, Arner Pål O, Westermark Samuel, Bernard Bruce A, Buchholz Olaf, Bergmann Lennart, Blomqvist Johan, Hoffstedt Erik, Näslund Tom, Britton Hernan, Concha Moustapha, Hassan Mikael, Rydén Jonas, Frisén Peter, Arner 2008, Dynamics of fat cell turnover in humans. Nature, 453, 783-7 (full text)

Roland, Schaette Richard, Kempter 2008, Development of hyperactivity after hearing loss in a computational model of the dorsal cochlear nucleus depends on neuron response type. Hear. Res., 240, 57-72 (full text)

Isao T, Tokuda Jaromir, Horácek Jan G, Svec Hanspeter, Herzel 2008, Bifurcations and chaos in register transitions of excised larynx experiments. Chaos, 18, 013102 (full text)

Roger J, Sullivan Edward H, Hagen Peter, Hammerstein 2008, Revealing the paradox of drug reward in human evolution. Proc. Biol. Sci., 275, 1231-41 (full text)

Anuradha, Chauhan Stefan, Legewie Pål O, Westermark Stephan, Lorenzen Hanspeter, Herzel 2008, A mesoscale model of G1/S phase transition in liver regeneration. J. Theor. Biol., 252, 465-73 (full text)

Christian, Leibold Anja, Gundlfinger Robert, Schmidt Kay, Thurley Dietmar, Schmitz Richard, Kempter 2008, Temporal compression mediated by short-term synaptic plasticity. Proc. Natl. Acad. Sci. U.S.A., 105, 4417-22 (full text)

James C W, Locke Pål O, Westermark Achim, Kramer Hanspeter, Herzel 2008, Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst Biol, 2, 22 (full text)

Kirsten, Hilgenboecker Peter, Hammerstein Peter, Schlattmann Arndt, Telschow John H, Werren 2008, How many species are infected with Wolbachia?–A statistical analysis of current data. FEMS Microbiol. Lett., 281, 215-20 (full text)

Matthias E, Futschik Hanspeter, Herzel 2008, Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinformatics, 24, 1063-9 (full text)

Steven A, Brown Dieter, Kunz Amelie, Dumas Pål O, Westermark Katja, Vanselow Amely, Tilmann-Wahnschaffe Hanspeter, Herzel Achim, Kramer 2008, Molecular insights into human daily behavior. Proc. Natl. Acad. Sci. U.S.A., 105, 1602-7 (full text)

Manuela, Benary Hanna, Bendfeldt Ria, Baumgrass Hanspeter, Herzel 2008, Modeling IL-2 gene expression in human regulatory T cells. Genome Inform, 20, 222-30 (full text)

Kay, Thurley Christian, Leibold Anja, Gundlfinger Dietmar, Schmitz Richard, Kempter 2008, Phase precession through synaptic facilitation. Neural Comput, 20, 1285-324 (full text)

Coen P H, Elemans Riccardo, Zaccarelli Hanspeter, Herzel 2008, Biomechanics and control of vocalization in a non-songbird. J R Soc Interface, 5, 691-703 (full text)

Christian, Leibold Richard, Kempter 2008, Sparseness constrains the prolongation of memory lifetime via synaptic metaplasticity. Cereb. Cortex, 18, 67-77 (full text)

Matthias E, Futschik Anna, Tschaut Gautam, Chaurasia Hanspeter, Herzel 2007, Graph-theoretical comparison reveals structural divergence of human protein interaction networks. Genome Inform, 18, 141-51 (full text)

Katarzyna, Bozek Szymon M, Kiełbasa Achim, Kramer Hanspeter, Herzel 2007, Promoter analysis of Mammalian clock controlled genes. Genome Inform, 18, 65-74 (full text)

Ilka M, Axmann Stefan, Legewie Hanspeter, Herzel 2007, A minimal circadian clock model. Genome Inform, 18, 54-64 (full text)

Szymon M, Kiełbasa Hanspeter, Herzel Ilka M, Axmann 2007, Regulatory elements of marine cyanobacteria. Genome Inform, 18, 1-11 (full text)

Sergio, Grimbs Joachim, Selbig Sascha, Bulik Hermann-Georg, Holzhütter Ralf, Steuer 2007, The stability and robustness of metabolic states: identifying stabilizing sites in metabolic networks. Mol. Syst. Biol., 3, 146 (full text)

Anja, Gundlfinger Christian, Leibold Katja, Gebert Marion, Moisel Dietmar, Schmitz Richard, Kempter 2007, Differential modulation of short-term synaptic dynamics by long-term potentiation at mouse hippocampal mossy fibre synapses. J. Physiol. (Lond.), 585, 853-65 (full text)

Björn, Voss Gregor, Gierga Ilka M, Axmann Wolfgang R, Hess 2007, A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria. BMC Genomics, 8, 375 (full text)

Silke, Reischl Katja, Vanselow Pål O, Westermark Nadine, Thierfelder Bert, Maier Hanspeter, Herzel Achim, Kramer 2007, Beta-TrCP1-mediated degradation of PERIOD2 is essential for circadian dynamics. J. Biol. Rhythms, 22, 375-86 (full text)

Debbie, Lindell Jacob D, Jaffe Maureen L, Coleman Matthias E, Futschik Ilka M, Axmann Trent, Rector Gregory, Kettler Matthew B, Sullivan Robert, Steen Wolfgang R, Hess George M, Church Sallie W, Chisholm 2007, Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature, 449, 83-6 (full text)

Arndt, Telschow Matthias, Flor Yutaka, Kobayashi Peter, Hammerstein John H, Werren 2007, Wolbachia-induced unidirectional cytoplasmic incompatibility and speciation: mainland-island model. PLoS ONE, 2, e701 (full text)

Ralf, Mrowka Andreas, Steege Charlotte, Kaps Hanspeter, Herzel Bernd J, Thiele Pontus B, Persson Nils, Blüthgen 2007, Dissecting the action of an evolutionary conserved non-coding region on renin promoter activity. Nucleic Acids Res., 35, 5120-9 (full text)

Ilka M, Axmann Julia, Holtzendorff Björn, Voss Philip, Kensche Wolfgang R, Hess 2007, Two distinct types of 6S RNA in Prochlorococcus. Gene, 406, 69-78 (full text)

Isao T, Tokuda Jaromir, Horácek Jan G, Svec Hanspeter, Herzel 2007, Comparison of biomechanical modeling of register transitions and voice instabilities with excised larynx experiments. J. Acoust. Soc. Am., 122, 519-31 (full text)

Ralf, Steuer , Computational approaches to the topology, stability and dynamics of metabolic networks. Phytochemistry, 68, 2139-51 (full text)

Stefan, Legewie Birgit, Schoeberl Nils, Blüthgen Hanspeter, Herzel 2007, Competing docking interactions can bring about bistability in the MAPK cascade. Biophys. J., 93, 2279-88 (full text)

Christian, Leibold Richard, Kempter 2008, Sparseness constrains the prolongation of memory lifetime via synaptic metaplasticity. Cereb. Cortex, 18, 67-77 (full text)

Samuel, Bernard Didier, Gonze Branka, Cajavec Hanspeter, Herzel Achim, Kramer 2007, Synchronization-induced rhythmicity of circadian oscillators in the suprachiasmatic nucleus. PLoS Comput. Biol., 3, e68 (full text)

Sébastien, Clodong Ulf, Dühring Luiza, Kronk Annegret, Wilde Ilka, Axmann Hanspeter, Herzel Markus, Kollmann 2007, Functioning and robustness of a bacterial circadian clock. Mol. Syst. Biol., 3, 90 (full text)

Ralf, Steuer Adriano Nunes, Nesi Alisdair R, Fernie Thilo, Gross Bernd, Blasius Joachim, Selbig 2007, From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinformatics, 23, 1378-85 (full text)

Nico, Blüthgen Florian, Menzel Thomas, Hovestadt Brigitte, Fiala Nils, Blüthgen 2007, Specialization, constraints, and conflicting interests in mutualistic networks. Curr. Biol., 17, 341-6 (full text)

Matthias E, Futschik Gautam, Chaurasia Hanspeter, Herzel 2007, Comparison of human protein-protein interaction maps. Bioinformatics, 23, 605-11 (full text)

Gautam, Chaurasia Yasir, Iqbal Christian, Hänig Hanspeter, Herzel Erich E, Wanker Matthias E, Futschik 2007, UniHI: an entry gate to the human protein interactome. Nucleic Acids Res., 35, D590-4 (full text)

Ralf, Steuer Katja, Morgenthal Wolfram, Weckwerth Joachim, Selbig 2007, A gentle guide to the analysis of metabolomic data. Methods Mol. Biol., 358, 105-26 (full text)

Pål O, Westermark Jeanette Hellgren, Kotaleski Anneli, Björklund Valdemar, Grill Anders, Lansner 2007, A mathematical model of the mitochondrial NADH shuttles and anaplerosis in the pancreatic beta-cell. Am. J. Physiol. Endocrinol. Metab., 292, E373-93 (full text)

Samuel, Bernard Hanspeter, Herzel 2006, Why do cells cycle with a 24 hour period? Genome Inform, 17, 72-9 (full text)

Gautam, Chaurasia Hanspeter, Herzel Erich E, Wanker Matthias E, Futschik 2006, Systematic functional assessment of human protein-protein interaction maps. Genome Inform, 17, 36-45 (full text)

Gautam, Chaurasia Yasir, Iqbal Christian, Hänig Hanspeter, Herzel Erich E, Wanker Matthias E, Futschik 2007, UniHI: an entry gate to the human protein interactome. Nucleic Acids Res., 35, D590-4 (full text)

Nils, Blüthgen 2006, Sequestration shapes the response of signal transduction cascades. IUBMB Life, 58, 659-63 (full text)

Katja, Vanselow Jens T, Vanselow Pål O, Westermark Silke, Reischl Bert, Maier Thomas, Korte Andreas, Herrmann Hanspeter, Herzel Andreas, Schlosser Achim, Kramer 2006, Differential effects of PER2 phosphorylation: molecular basis for the human familial advanced sleep phase syndrome (FASPS). Genes Dev., 20, 2660-72 (full text)

Stefan, Legewie Nils, Blüthgen Hanspeter, Herzel 2006, Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability. PLoS Comput. Biol., 2, e120 (full text)

Ovidiu, König Roland, Schaette Richard, Kempter Manfred, Gross 2006, Course of hearing loss and occurrence of tinnitus. Hear. Res., 221, 59-64 (full text)

Ralf, Steuer Peter, Humburg Joachim, Selbig 2006, Validation and functional annotation of expression-based clusters based on gene ontology. BMC Bioinformatics, 7, 380 (full text)

Nico, Blüthgen Florian, Menzel Nils, Blüthgen 2006, Measuring specialization in species interaction networks. BMC Ecol., 6, 9 (full text)

Ralf, Steuer Thilo, Gross Joachim, Selbig Bernd, Blasius 2006, Structural kinetic modeling of metabolic networks. Proc. Natl. Acad. Sci. U.S.A., 103, 11868-73 (full text)

Pål O, Westermark Jeanette Hellgren, Kotaleski Anneli, Björklund Valdemar, Grill Anders, Lansner 2007, A mathematical model of the mitochondrial NADH shuttles and anaplerosis in the pancreatic beta-cell. Am. J. Physiol. Endocrinol. Metab., 292, E373-93 (full text)

Roland, Schaette Richard, Kempter 2006, Development of tinnitus-related neuronal hyperactivity through homeostatic plasticity after hearing loss: a computational model. Eur. J. Neurosci., 23, 3124-38 (full text)

Lokesh, Kumar Matthias, Futschik Hanspeter, Herzel 2006, DNA motifs and sequence periodicities. In Silico Biol. (Gedrukt), 6, 71-8 (full text)

Ralf, Steuer 2006, Review: on the analysis and interpretation of correlations in metabolomic data. Brief. Bioinformatics, 7, 151-8 (full text)

Olof, Leimar Peter, Hammerstein Tom J M, Van Dooren 2006, A new perspective on developmental plasticity and the principles of adaptive morph determination. Am. Nat., 167, 367-76 (full text)

Ulf, Dühring Ilka M, Axmann Wolfgang R, Hess Annegret, Wilde 2006, An internal antisense RNA regulates expression of the photosynthesis gene isiA. Proc. Natl. Acad. Sci. U.S.A., 103, 7054-8 (full text)

Samuel, Bernard Branka, Cajavec Laurent, Pujo-Menjouet Michael C, Mackey Hanspeter, Herzel 2006, Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations. Philos Trans A Math Phys Eng Sci, 364, 1155-70 (full text)

Christian, Leibold Richard, Kempter 2006, Memory capacity for sequences in a recurrent network with biological constraints. Neural Comput, 18, 904-41 (full text)

Nils, Blüthgen Frank J, Bruggeman Stefan, Legewie Hanspeter, Herzel Hans V, Westerhoff Boris N, Kholodenko 2006, Effects of sequestration on signal transduction cascades. FEBS J., 273, 895-906 (full text)

Edward H, Hagen Peter, Hammerstein 2006, Game theory and human evolution: a critique of some recent interpretations of experimental games. Theor Popul Biol, 69, 339-48 (full text)

Branka, Cajavec Hanspeter, Herzel Samuel, Bernard 2006, Death of neuronal clusters contributes to variance of age at onset in Huntington's disease. Neurogenetics, 7, 21-5 (full text)

Obul Reddy, Bandapalli Martina, Geheeb Dennis, Kobelt Katrin, Kuehnle Sefer, Elezkurtaj Jens, Herrmann Axel M, Gressner Ralf, Weiskirchen Dieter, Beule Nils, Blüthgen Hanspeter, Herzel Claudia, Franke Karsten, Brand 2006, Global analysis of host tissue gene expression in the invasive front of colorectal liver metastases. Int. J. Cancer, 118, 74-89 (full text)

Peter, Hammerstein Edward H, Hagen 2005, The second wave of evolutionary economics in biology. Trends Ecol. Evol. (Amst.), 20, 604-9 (full text)

Branka, Cajavec Samuel, Bernard Hanspeter, Herzel 2005, Aggregation in Huntington's disease: insights through modelling. Genome Inform, 16, 262-71 (full text)

Nils, Blüthgen Karsten, Brand Branka, Cajavec Maciej, Swat Hanspeter, Herzel Dieter, Beule 2005, Biological profiling of gene groups utilizing Gene Ontology. Genome Inform, 16, 106-15 (full text)

Arndt, Telschow Peter, Hammerstein John H, Werren 2005, The effect of Wolbachia versus genetic incompatibilities on reinforcement and speciation. Evolution, 59, 1607-19 (full text)

Stefan, Legewie Nils, Blüthgen Reinhold, Schäfer Hanspeter, Herzel 2005, Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction. PLoS Comput. Biol., 1, e54 (full text)

Szymon M, Kielbasa Didier, Gonze Hanspeter, Herzel 2005, Measuring similarities between transcription factor binding sites. BMC Bioinformatics, 6, 237 (full text)

Ilka M, Axmann Philip, Kensche Jörg, Vogel Stefan, Kohl Hanspeter, Herzel Wolfgang R, Hess 2005, Identification of cyanobacterial non-coding RNAs by comparative genome analysis. Genome Biol., 6, R73 (full text)

Axel, Kowald Marina, Jendrach Sandra, Pohl Jürgen, Bereiter-Hahn Peter, Hammerstein 2005, On the relevance of mitochondrial fusions for the accumulation of mitochondrial deletion mutants: a modelling study. Aging Cell, 4, 273-83 (full text)

David T, Blake Fabrizio, Strata Richard, Kempter Michael M, Merzenich 2005, Experience-dependent plasticity in S1 caused by noncoincident inputs. J. Neurophysiol., 94, 2239-50 (full text)

Stefan, Legewie Nils, Blüthgen Hanspeter, Herzel 2005, Quantitative analysis of ultrasensitive responses. FEBS J., 272, 4071-9 (full text)

Marina, Jendrach Sandra, Pohl Monika, Vöth Axel, Kowald Peter, Hammerstein Jürgen, Bereiter-Hahn , Morpho-dynamic changes of mitochondria during ageing of human endothelial cells. Mech. Ageing Dev., 126, 813-21 (full text)

Peter, Hammerstein 2005, Strategic analysis in evolutionary genetics and the theory of games. J. Genet., 84, 7-12 (full text)

Didier, Gonze Samuel, Bernard Christian, Waltermann Achim, Kramer Hanspeter, Herzel 2005, Spontaneous synchronization of coupled circadian oscillators. Biophys. J., 89, 120-9 (full text)

Malte, Kleinschmidt Olav, Grundmann Nils, Blüthgen Hans-Ulrich, Mösch Gerhard H, Braus 2005, Transcriptional profiling of Saccharomyces cerevisiae cells under adhesion-inducing conditions. Mol. Genet. Genomics, 273, 382-93 (full text)

Hermann, Wagner Sandra, Brill Richard, Kempter Catherine E, Carr 2005, Microsecond precision of phase delay in the auditory system of the barn owl. J. Neurophysiol., 94, 1655-8 (full text)

Isao, Tokuda Hanspeter, Herzel 2005, Detecting synchronizations in an asymmetric vocal fold model from time series data. Chaos, 15, 13702 (full text)

Florian, Geier Sabine, Becker-Weimann Achim, Kramer Hanspeter, Herzel 2005, Entrainment in a model of the mammalian circadian oscillator. J. Biol. Rhythms, 20, 83-93 (full text)

Nils, Blüthgen Szymon M, Kiełbasa Hanspeter, Herzel 2005, Inferring combinatorial regulation of transcription in silico. Nucleic Acids Res., 33, 272-9 (full text)

Matthias, Truss Maciej, Swat Szymon M, Kielbasa Reinhold, Schäfer Hanspeter, Herzel Christian, Hagemeier 2005, HuSiDa–the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res., 33, D108-11 (full text)