Show pageOld revisionsBacklinksBack to top This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong. <html> <h1>Good news, everyone</h1> <a href="#speakers">Upcoming Speakers</a><br /> <a href="#seminars">Past Seminars</a><br /> <a href="#organisation">Organisation</a><br /> <a href="#alumni">Meeting Alumni</a> <h2 id="speakers">Upcoming Speakers</h2> <table class="table"> <thead> <tr> <th>Predicted Date [*]</th> <th>Name</th> <th>Group</th> <th>Location</th> </tr> </thead> <tbody> <tr> <td>2019-12-03</td> <td><b> <a href="https://livermetabolism.com">König, Matthias (PI)</a> </b></td> <td>Systems Biology of Liver</td> <td>ITB-House4</td> </tr> <tr> <td>2019-12-10</td> <td><b> Pfeiffer, Paul </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2019-12-17</td> <td><b> Poel, Winnie </b></td> <td>Collective Information Processing</td> <td>ITB-House4</td> </tr> <tr> <td>2020-01-07</td> <td><b> Rose, Pia </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-01-14</td> <td><b> Contreras, Susana </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-01-21</td> <td><b> Thurley, Kevin (PI) </b></td> <td>Systems Biology of Inflammation</td> <td>ITB-House4</td> </tr> <tr> <td>2020-01-28</td> <td><b> Kuokkanen, Paula </b></td> <td>Theoretical Neuroscience</td> <td>ITB-House4</td> </tr> <tr> <td>2020-02-04</td> <td><b> Schieferstein, Natalie </b></td> <td>Theoretical Neuroscience</td> <td>ITB-House4</td> </tr> <tr> <td>2020-02-11</td> <td><b> D'Albis, Tiziano </b></td> <td>Theoretical Neuroscience</td> <td>ITB-House4</td> </tr> <tr> <td>2020-02-18</td> <td><b> Burt, Phillipp </b></td> <td>Systems Biology of Inflammation</td> <td>ITB-House4</td> </tr> <tr> <td>2020-02-25</td> <td><b> Faizi, Marjan </b></td> <td>Metabolic Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-03-03</td> <td><b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/schuppner">Schuppner, Rike-Benjamin</a> </b></td> <td>System Administration</td> <td>ITB-House4</td> </tr> <tr> <td>2020-03-10</td> <td><b> Klamser, Pascal </b></td> <td>Collective Information Processing</td> <td>ITB-House4</td> </tr> <tr> <td>2020-03-17</td> <td><b> Borek, Zuzanna </b></td> <td>Systems Biology of Inflammation</td> <td>ITB-House4</td> </tr> <tr> <td>2020-03-24</td> <td><b> Upadhyay, Abhishek </b></td> <td>Molecular and Cellular Evolution</td> <td>ITB-House4</td> </tr> <tr> <td>2020-03-31</td> <td><b> Basti, Alireza </b></td> <td>Systems Biology of Cancer</td> <td>ITB-House4</td> </tr> <tr> <td>2020-04-07</td> <td><b> Uhlitz, Florian </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-04-14</td> <td><b> Astaburuaga, Rosario </b></td> <td></td> <td>ITB-House4</td> </tr> <tr> <td>2020-04-21</td> <td><b> <a href="http://itb.biologie.hu-berlin.de/~bharath/">Ananthasubramaniam, Bharath</a> </b></td> <td>Molecular and Cellular Evolution</td> <td>ITB-House4</td> </tr> <tr> <td>2020-04-28</td> <td><b> Wilkins, Adams </b></td> <td></td> <td>ITB-House4</td> </tr> <tr> <td>2020-05-05</td> <td><b> Carrillo-Bustamante, Paola </b></td> <td>Vector Biology, MPI</td> <td>ITB-House4</td> </tr> <tr> <td>2020-05-12</td> <td><b> Schreiber, Susanne (PI) </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-05-19</td> <td><b> <a href="http://rocs.hu-berlin.de/">Brockmann, Dirk (PI)</a> </b></td> <td>Research on Complex Systems</td> <td>ITB-House4</td> </tr> <tr> <td>2020-05-26</td> <td><b> Lauterbach, Elvira & Winkelhöfer Karin </b></td> <td>ITB Administration</td> <td>ITB-House4</td> </tr> <tr> <td>2020-06-02</td> <td><b> <a href="https://itb.biologie.hu-berlin.de/~benary">Benary, Manuela</a> </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-06-09</td> <td><b> Sell, Thomas </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-06-16</td> <td><b> Lauterbach, Elvira </b></td> <td>Administration</td> <td>ITB-House4</td> </tr> <tr> <td>2020-06-23</td> <td><b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/grosstor">Gross, Torsten</a> </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-06-30</td> <td><b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/herzel">Herzel, Hanspeter (PI)</a> </b></td> <td>Molecular and Cellular Evolution</td> <td>ITB-House4</td> </tr> <tr> <td>2020-07-07</td> <td><b> Behbood, Mahraz </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-07-14</td> <td><b> Schleimer, Jan-Hendrik </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-07-21</td> <td><b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/klinger">Klinger, Bertram</a> </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-07-28</td> <td><b> Grzegorzewski, Jan </b></td> <td>Systems Biology Of Liver</td> <td>ITB-House4</td> </tr> <tr> <td>2020-08-04</td> <td><b> Del Olmo, Marta </b></td> <td>Molecular and Cellular Evolution</td> <td>ITB-House4</td> </tr> <tr> <td>2020-08-11</td> <td><b> Relógio, Angela (PI) </b></td> <td>Systems Biology of Cancer</td> <td>ITB-House4</td> </tr> <tr> <td>2020-08-18</td> <td><b> <a href="http://www.sys-bio.net/">Bluethgen, Nils (PI)</a> </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-08-25</td> <td><b> Meisig, Johannes </b></td> <td>Systems Biology of Molecular Networks</td> <td>ITB-House4</td> </tr> <tr> <td>2020-09-01</td> <td><b> Reifenstein, Eric </b></td> <td>Computational Neurophysiology</td> <td>ITB-House4</td> </tr> <tr> <td>2020-09-08</td> <td><b> Winkelhöfer, Karin </b></td> <td>ITB</td> <td>ITB-House4</td> </tr> <tr> <td>2020-09-15</td> <td><b> Hammerstein, Peter (PI) </b></td> <td>Evolution of Organismic Systems</td> <td>ITB-House4</td> </tr> <tr> <td>2020-09-22</td> <td><b> Schmal, Christoph </b></td> <td>Molecular and Cellular Evolution</td> <td>ITB-House4</td> </tr> <tr> <td>2020-09-29</td> <td><b> Romanczuk, Pawel (PI) </b></td> <td>Collective Information Processing</td> <td>ITB-House4</td> </tr> <tr> <td>2020-10-06</td> <td><b> Steuer, Ralf (PI) </b></td> <td>Metabolic Networks</td> <td>ITB-House4</td> </tr> </tbody> </table> [*] Dates are predicted by skipping German holidays on Tuesdays in the python <code>holidays</code> package. Holiday breaks like over Christmas and local Berlin holidays are not accounted for and can result in changes of the final date of your presentation. <h2 id="seminars">Past Seminars</h2> <table class="table"> <thead> <tr> <th>Date</th> <th>Speaker</th> <th>Title</th> <th>Slides</th> </tr> </thead> <tbody> <tr> <td>2019-11-26</td> <td> <b> Steuer, Ralf (PI)<br /> </b> Metabolic Networks </td> <td>None</td> <td></td> <td></td> </tr> <tr> <td>2019-11-19</td> <td> <b> Raghavendra Gadagkar (PI)<br /> </b> </td> <td>Direct Fitness Options for Workers in the Indian Paper Wasp Ropalidia marginata</td> <td></td> <td></td> </tr> <tr> <td>2019-11-12</td> <td> <b> Romanczuk, Pawel (PI)<br /> </b> Collective Information Processing </td> <td></td> <td></td> <td></td> </tr> <tr> <td>2019-11-05</td> <td> <b> Schmal, Christoph<br /> </b> Molecular and Cellular Evolution </td> <td>Circadian entrainment across seasons: lessons from a red bread mold</td> <td></td> <td></td> </tr> <tr> <td>2019-10-15</td> <td> <b> Reifenstein, Eric<br /> </b> Computational Neurophysiology </td> <td>The benefit of phase precession for sequence learning</td> <td></td> <td></td> </tr> <tr> <td>2019-10-08</td> <td> <b> Meisig, Johannes<br /> </b> Systems Biology of Molecular Networks </td> <td>Using Slam-seq to characterize RNA processing rates globally.</td> <td></td> <td></td> </tr> <tr> <td>2019-10-01</td> <td> <b> <a href="http://www.sys-bio.net/">Bluethgen, Nils (PI)</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Dissecting Colon Cancer, Cell By Cell</td> <td></td> <td></td> </tr> <tr> <td>2019-09-24</td> <td> <b> Relógio, Angela (PI)<br /> </b> Systems Biology of Cancer </td> <td>A role for the circadian clock in metastasis: insights from a zebrafish model.</td> <td></td> <td></td> </tr> <tr> <td>2019-09-17</td> <td> <b> Li, Yin<br /> </b> Systems Biology of Cancer </td> <td>The bidirectional interplay between the circadian clock and the TGFβ/SMAD4 pathway modulates metastasis and drug response in pancreatic cancer.</td> <td></td> <td></td> </tr> <tr> <td>2019-09-10</td> <td> <b> Del Olmo, Marta<br /> </b> Molecular and Cellular Evolution </td> <td>Modelling Circadian Redox Oscillations</td> <td></td> <td></td> </tr> <tr> <td>2019-09-03</td> <td> <b> <a href="wiki/members/elathman">El-Athman, Rukeia</a><br /> </b> Systems Biology of Cancer </td> <td>A Landscape of Circadian and Ultradian Splicing Events in Mammalian Tissues</td> <td></td> <td></td> </tr> <tr> <td>2019-07-09</td> <td> <b> Grzegorzewski, Jan<br /> </b> Systems Biology Of Liver </td> <td>A Pharmacokinetics Database for Individualized and Stratified Computational Modelling</td> <td></td> <td></td> </tr> <tr> <td>2019-07-02</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/klinger">Klinger, Bertram</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Mass-spec methods for phospho-protein detection</td> <td></td> <td></td> </tr> <tr> <td>2019-06-25</td> <td> <b> Behbood, Mahraz<br /> </b> Computational Neurophysiology </td> <td>Activity-Induced Changes in Ion Concentrations Switch Cellular Dynamics in Favor of the Brain's Rhythmic Activities (A Fast Slow Bifurcation Analysis)</td> <td></td> <td></td> </tr> <tr> <td>2019-06-18</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/herzel">Herzel, Hanspeter (PI)</a><br /> </b> Molecular and Cellular Evolution </td> <td>Nonlinear dynamics of the voice</td> <td></td> <td></td> </tr> <tr> <td>2019-06-04</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/grosstor">Gross, Torsten</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Robust network inference using response logic</td> <td></td> <td></td> </tr> <tr> <td>2019-05-28</td> <td> <b> Clara Jongen<br /> </b> Research on Complex Systems </td> <td>Context specific role of airports in global disease dynamics</td> <td></td> <td></td> </tr> <tr> <td>2019-05-21</td> <td> <b> <a href="https://livermetabolism.com">König, Matthias (PI)</a><br /> </b> Systems Biology of Liver </td> <td>Reproducible research</td> <td></td> <td></td> </tr> <tr> <td>2019-05-14</td> <td> <b> Sell, Thomas<br /> </b> Systems Biology of Molecular Networks </td> <td>Signalling cell by cell with mass cytometry</td> <td></td> <td></td> </tr> <tr> <td>2019-05-07</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/~benary">Benary, Manuela</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Precision oncology using big data – How to predict relevant targets and therapies?</td> <td></td> <td></td> </tr> <tr> <td>2019-04-30</td> <td> <b> Pett, Patrick<br /> </b> Molecular and Cellular Evolution </td> <td>Defense tissue specific circadian clock</td> <td></td> <td></td> </tr> <tr> <td>2019-04-23</td> <td> <b> Sojo, Víctor<br /> </b> </td> <td>1+1=3: Membranes, proteins, and the intertwining branches of the Tree of Life</td> <td></td> <td></td> </tr> <tr> <td>2019-04-16</td> <td> <b> Lauterbach, Elvira & Winkelhöfer Karin<br /> </b> ITB Administration </td> <td>Security information and instructions</td> <td></td> <td></td> </tr> <tr> <td>2019-04-02</td> <td> <b> Schreiber, Susanne (PI)<br /> </b> Computational Neurophysiology </td> <td>Synchronization with a new type of spike</td> <td></td> <td></td> </tr> <tr> <td>2019-03-24</td> <td> <b> Carrillo-Bustamante, Paola<br /> </b> Vector Biology, MPI </td> <td>How can we understand the transmission and evolution of malaria? Insights from an in-silico individual-based model</td> <td></td> <td></td> </tr> <tr> <td>2019-03-12</td> <td> <b> <a href="http://itb.biologie.hu-berlin.de/~bharath/">Ananthasubramaniam, Bharath</a><br /> </b> Molecular and Cellular Evolution </td> <td>Ultradian rhythms in the transcriptome of Neurospora crassa</td> <td><a href="http://itb.biologie.hu-berlin.de/~bharath/" target="_blank">http://itb.biologie.hu-berlin.de/~bharath/</a></td> <td></td> </tr> <tr> <td>2019-03-05</td> <td> <b> Astaburuaga, Rosario<br /> </b> </td> <td>Mathematical modeling of lysosomal ion homeostasis</td> <td></td> <td></td> </tr> <tr> <td>2019-02-26</td> <td> <b> Uhlitz, Florian<br /> </b> Systems Biology of Molecular Networks </td> <td>Single Cell RNA-Seq of Colorectal Cancer Organoids</td> <td></td> <td></td> </tr> <tr> <td>2019-02-19</td> <td> <b> Basti, Alireza<br /> </b> Systems Biology of Cancer </td> <td>In vivo and in vitro investigation of the circadian clock in human colorectal cancer</td> <td></td> <td></td> </tr> <tr> <td>2019-02-12</td> <td> <b> Upadhyay, Abhishek<br /> </b> Molecular and Cellular Evolution </td> <td>A degradation switch enables rhythm in a Neurospora clock model</td> <td></td> <td></td> </tr> <tr> <td>2019-02-05</td> <td> <b> Klamser, Pascal<br /> </b> Collective Information Processing </td> <td>Uncommon Risk-Behavior Evolution Due to Size-Selective Harvesting in Zebrafish</td> <td></td> <td></td> </tr> <tr> <td>2019-01-29</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/schuppner">Schuppner, Rike-Benjamin</a><br /> </b> System Administration </td> <td>Frequently asked questions</td> <td><a href="https://itbgit.biologie.hu-berlin.de/schuppner/itb-infrastructure-2019/blob/master/ITB%20Meeting%202019.pdf" target="_blank">https://itbgit.biologie.hu-berlin.de/schuppner/itb-infrastructure-2019/blob/master/ITB%20Meeting%202019.pdf</a></td> <td></td> </tr> <tr> <td>2019-01-22</td> <td> <b> Faizi, Marjan<br /> </b> Metabolic Networks </td> <td>Modeling a self-adapting system of phototrophic growth</td> <td></td> <td></td> </tr> <tr> <td>2019-01-15</td> <td> <b> D'Albis, Tiziano<br /> </b> Theoretical Neuroscience </td> <td>The origin of grid-cell patterns</td> <td></td> <td></td> </tr> <tr> <td>2019-01-08</td> <td> <b> Schieferstein, Natalie<br /> </b> Theoretical Neuroscience </td> <td>Mechanisms of phase precession in the hippocampal formation</td> <td></td> <td></td> </tr> <tr> <td>2018-12-11</td> <td> <b> Genov, Nikolai<br /> </b> Systems Biology of Cancer </td> <td>Time-dependent Isoform Expression Changes</td> <td></td> <td></td> </tr> <tr> <td>2018-12-04</td> <td> <b> Kuokkanen, Paula<br /> </b> Theoretical Neuroscience </td> <td>From single cells to extracellular field potentials and EEG</td> <td></td> <td></td> </tr> <tr> <td>2018-11-27</td> <td> <b> Burt, Phillipp<br /> </b> Systems Biology of Inflammation </td> <td>Response-time modeling of T helper cell differentiation</td> <td></td> <td></td> </tr> <tr> <td>2018-11-20</td> <td> <b> Thurley, Kevin (PI)<br /> </b> Systems Biology of Inflammation </td> <td>Modeling cell-cell communication dynamics in inflammatory responses</td> <td></td> <td></td> </tr> <tr> <td>2018-11-13</td> <td> <b> Contreras, Susana<br /> </b> Computational Neurophysiology </td> <td>An activity-induced transition in single-cell spiking dynamics</td> <td></td> <td></td> </tr> <tr> <td>2018-11-06</td> <td> <b> Rose, Pia<br /> </b> Computational Neurophysiology </td> <td>Neurobiology without neurons</td> <td></td> <td></td> </tr> <tr> <td>2018-10-30</td> <td> <b> Romanczuk, Pawel (PI)<br /> </b> Collective Information Processing </td> <td>Less is more - Limited attention facilitates collective migration in complex environments</td> <td></td> <td></td> </tr> <tr> <td>2018-10-23</td> <td> <b> Pfeiffer, Paul<br /> </b> Computational Neurophysiology </td> <td>Short term memory - Bistable neurons and reverberatory networks</td> <td></td> <td></td> </tr> <tr> <td>2018-10-16</td> <td> <b> <a href="https://livermetabolism.com">König, Matthias (PI)</a><br /> </b> Systems Biology of Liver </td> <td>Modelling liver function tests - LiMAx</td> <td></td> <td></td> </tr> <tr> <td>2018-10-09</td> <td> <b> Steuer, Ralf (PI)<br /> </b> Metabolic Networks </td> <td>Modelling Phototrophic Growth</td> <td></td> <td></td> </tr> <tr> <td>2018-10-02</td> <td> <b> Carlos Aguilar (PI)<br /> </b> </td> <td>Mapping the fungal web: Ecosystem functions to inspire human-made networks</td> <td></td> <td></td> </tr> <tr> <td>2018-09-18</td> <td> <b> Schmal, Christoph<br /> </b> Molecular and Cellular Evolution </td> <td>Dissociation of Intracellular Feedback Loops in the Mammalian Circadian Clock</td> <td></td> <td></td> </tr> <tr> <td>2018-09-11</td> <td> <b> Rydenfelt, Mattias<br /> </b> Systems Biology of Molecular Networks </td> <td>None</td> <td></td> <td></td> </tr> <tr> <td>2018-07-17</td> <td> <b> Hammerstein, Peter (PI)<br /> </b> Evolution of Organismic Systems </td> <td>Celebrating the end of the semester with a look at Australian outback adventures</td> <td></td> <td></td> </tr> <tr> <td>2018-07-10</td> <td> <b> Winkelhöfer, Karin<br /> </b> ITB </td> <td>Berlin waste water management</td> <td></td> <td></td> </tr> <tr> <td>2018-07-03</td> <td> <b> Reifenstein, Eric<br /> </b> Computational Neurophysiology </td> <td>Neuronal mechanisms of sequence learning</td> <td></td> <td></td> </tr> <tr> <td>2018-06-26</td> <td> <b> Genov, Nikolai<br /> </b> Systems Biology of Cancer </td> <td></td> <td></td> <td></td> </tr> <tr> <td>2018-06-19</td> <td> <b> Evangelista, Roberta<br /> </b> Theoretical Neuroscience </td> <td>A 3-populations spiking model for the generation of hippocampal sharp wave-ripple oscillations</td> <td></td> <td></td> </tr> <tr> <td>2018-06-12</td> <td> <b> Meisig, Johannes<br /> </b> Systems Biology of Molecular Networks </td> <td>Reconstructing gene regulatory networks in stem cells</td> <td></td> <td></td> </tr> <tr> <td>2018-06-05</td> <td> <b> <a href="http://www.sys-bio.net/">Bluethgen, Nils (PI)</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Colon cancer - cell by cell</td> <td></td> <td></td> </tr> <tr> <td>2018-05-28</td> <td> <b> Li, Yin<br /> </b> Systems Biology of Cancer </td> <td>Characterization of circadian clock in mammalian cancer cells</td> <td></td> <td></td> </tr> <tr> <td>2018-05-21</td> <td> <b> Del Olmo, Marta<br /> </b> Molecular and Cellular Evolution </td> <td>Circadian redox system</td> <td></td> <td></td> </tr> <tr> <td>2018-05-15</td> <td> <b> <a href="wiki/members/elathman">El-Athman, Rukeia</a><br /> </b> Systems Biology of Cancer </td> <td>Analysis of the circadian splicosome</td> <td></td> <td></td> </tr> <tr> <td>2018-05-08</td> <td> <b> Grzegorzewski, Janek<br /> </b> </td> <td>Virus Classification by Pattern Recognition applied on Peptide-Virus Interactions</td> <td></td> <td></td> </tr> <tr> <td>2018-04-24</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/klinger">Klinger, Bertram</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Studying oncogenic effects of RAS</td> <td></td> <td></td> </tr> <tr> <td>2018-04-17</td> <td> <b> Holzbecher, André<br /> </b> Theoretical Neuroscience </td> <td>Interneuronal gap junctions increase the synchrony of hippocampal ripple oscillations</td> <td></td> <td></td> </tr> <tr> <td>2018-03-27</td> <td> <b> Relógio, Angela (PI)<br /> </b> Systems Biology of Cancer </td> <td>A brief history of time</td> <td></td> <td></td> </tr> <tr> <td>2018-03-20</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/herzel">Herzel, Hanspeter (PI)</a><br /> </b> Molecular and Cellular Evolution </td> <td>The Choroid Plexus is an Important Circadian Clock Component</td> <td></td> <td></td> </tr> <tr> <td>2018-03-13</td> <td> <b> Schleimer, Jan-Hendrik<br /> </b> Computational Neurophysiology </td> <td>It's: Monty Python's Flying Circuit</td> <td><a href="https://github.com/matthiaskoenig/itbmeeting/raw/master/slides/2018-03-13_schleimer.pdf" target="_blank">https://github.com/matthiaskoenig/itbmeeting/raw/master/slides/2018-03-13_schleimer.pdf</a></td> <td></td> </tr> <tr> <td>2018-03-06</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/grosstor">Gross, Torsten</a><br /> </b> Systems Biology of Molecular Networks </td> <td>A signalling network model predicts differential drug response of PIK3 mutants in a colon cancer cell line.</td> <td><a href="/wiki/_media/itbmeeting/wiki/members/grosstor" class="media mediafile mf_pdf" title="itbmeeting:wiki/members/grosstor">wiki/members/grosstor</a></td> <td></td> </tr> <tr> <td>2018-02-27</td> <td> <b> <a href="https://livermetabolism.com">König, Matthias (PI)</a><br /> </b> Systems Biology of Liver </td> <td>A Quick Introduction to Version Control with Git</td> <td></td> <td></td> </tr> <tr> <td>2018-02-20</td> <td> <b> Clara Jongen<br /> </b> Research on Complex Systems </td> <td>Defining the scope: A context specific approach to identifying key airports during a pandemic.</td> <td></td> <td></td> </tr> <tr> <td>2018-02-13</td> <td> <b> Sell, Thomas<br /> </b> Systems Biology of Molecular Networks </td> <td>What is mass cytometry?</td> <td></td> <td></td> </tr> <tr> <td>2018-01-30</td> <td> <b> <a href="wiki/members/witzel">Witzel, Franziska</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Integral feedback control in Erk1/2 signalling</td> <td><a href="/wiki/_media/itbmeeting/2018-01-30_witzel.pdf" class="media mediafile mf_pdf" title="itbmeeting:2018-01-30_witzel.pdf">2018-01-30_witzel.pdf</a></td> <td></td> </tr> <tr> <td>2018-01-23</td> <td> <b> Wilkins, Adams<br /> </b> </td> <td></td> <td></td> <td></td> </tr> <tr> <td>2018-01-16</td> <td> <b> Upadhyay, Abhishek<br /> </b> Molecular and Cellular Evolution </td> <td>Mathematical modeling of circadian clock in Neurospora crassa</td> <td></td> <td></td> </tr> <tr> <td>2018-01-09</td> <td> <b> Obermayer, Benedikt<br /> </b> Bioinformatics Core Unit </td> <td>Global characterization of post-transcriptional gene regulation at the onset of neuronal differentiation</td> <td></td> <td></td> </tr> <tr> <td>2017-12-12</td> <td> <b> Uhlitz, Florian<br /> </b> Systems Biology of Molecular Networks </td> <td>Single cell RNAseq of colorectal cancer</td> <td></td> <td></td> </tr> <tr> <td>2017-12-05</td> <td> <b> Basti, Alireza<br /> </b> Systems Biology of Cancer </td> <td>Gene editing via CRISPR/CAS9</td> <td></td> <td></td> </tr> <tr> <td>2017-11-28</td> <td> <b> Ünal, Evrim Besray<br /> </b> Systems Biology of Molecular Networks </td> <td>Systems level expression correlation of Ras-like GTPase regulators and dysregulation in cancer.</td> <td></td> <td></td> </tr> <tr> <td>2017-11-21</td> <td> <b> <a href="http://itb.biologie.hu-berlin.de/~bharath/">Ananthasubramaniam, Bharath</a><br /> </b> Molecular and Cellular Evolution </td> <td>BodyTime: A new diagnostic tool to assess the internal clock</td> <td></td> <td></td> </tr> <tr> <td>2017-11-14</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/schuppner">Schuppner, Rike-Benjamin</a><br /> </b> System Administration </td> <td>Technical Depth - Computers at the ITB</td> <td><a href="http://docs.itb.pri/TechnicalDepth/assets/player/KeynoteDHTMLPlayer.html#1" target="_blank">http://docs.itb.pri/TechnicalDepth/assets/player/KeynoteDHTMLPlayer.html#1</a></td> <td></td> </tr> <tr> <td>2017-11-07</td> <td> <b> Klamser, Pascal<br /> </b> Collective Information Processing </td> <td>Collective Performance in Presence of a Predator: An inhomogeneous, local field.</td> <td></td> <td></td> </tr> <tr> <td>2017-10-24</td> <td> <b> Faizi, Marjan<br /> </b> Metabolic Networks </td> <td>Cyanobacterial growth with intrinsic feedback</td> <td></td> <td></td> </tr> <tr> <td>2017-10-17</td> <td> <b> Schieferstein, Natalie<br /> </b> Theoretical Neuroscience </td> <td>Mechanisms of phase precession in the hippocampal formation.</td> <td></td> <td></td> </tr> <tr> <td>2017-10-10</td> <td> <b> D'Albis, Tiziano<br /> </b> Theoretical Neuroscience </td> <td>The origin of grid-cell patterns.</td> <td></td> <td></td> </tr> <tr> <td>2017-09-26</td> <td> <b> Kuokkanen, Paula<br /> </b> Theoretical Neuroscience </td> <td>Decomposing the neurophonic in the NL of the Barn Owl.</td> <td></td> <td></td> </tr> <tr> <td>2017-09-19</td> <td> <b> Contreras, Susana<br /> </b> Computational Neurophysiology </td> <td>The wonderlust gene</td> <td></td> <td></td> </tr> <tr> <td>2017-09-05</td> <td> <b> Rose, Pia<br /> </b> Computational Neurophysiology </td> <td>The influence of temperature on neuronal processing</td> <td></td> <td></td> </tr> <tr> <td>2017-07-18</td> <td> <b> Paul Pfeiffer<br /> </b> </td> <td>Test-driven development</td> <td></td> <td></td> </tr> <tr> <td>2017-07-11</td> <td> <b> <a href="https://livermetabolism.com">König, Matthias (PI)</a><br /> </b> Systems Biology of Liver </td> <td>Computational modeling of liver function tests: Why you need more coffee when you smoke</td> <td></td> <td></td> </tr> <tr> <td>2017-07-04</td> <td> <b> Romanczuk, Pawel (PI)<br /> </b> Collective Information Processing </td> <td>Collective Information Processing: How critical is it to be critical?</td> <td></td> <td></td> </tr> <tr> <td>2017-06-27</td> <td> <b> Karin Winklhöfer und Elvira Lauterbach<br /> </b> </td> <td>ITB Symposium Organization Meeting</td> <td></td> <td></td> </tr> <tr> <td>2017-06-20</td> <td> <b> Steuer, Ralf (PI)<br /> </b> Metabolic Networks </td> <td>The protein economy of growth: How to multiply yourself in seven steps.</td> <td></td> <td></td> </tr> <tr> <td>2017-06-13</td> <td> <b> Schreiber, Susanne (PI)<br /> </b> Computational Neurophysiology </td> <td>Cold-induced silencing of neuronal activity</td> <td></td> <td></td> </tr> <tr> <td>2017-06-06</td> <td> <b> Schmal, Christoph<br /> </b> Molecular and Cellular Evolution </td> <td>Mammalian circadian clock - Network of coupled oscillators</td> <td></td> <td></td> </tr> <tr> <td>2017-05-30</td> <td> <b> Rydenfelt, Mattias<br /> </b> Systems Biology of Molecular Networks </td> <td>Drug sensitivity in cancer cell lines</td> <td></td> <td></td> </tr> <tr> <td>2017-05-23</td> <td> <b> Remme, Michiel<br /> </b> Computational Neurophysiology and Neuroscience </td> <td>The energetic cost of the brain</td> <td></td> <td></td> </tr> <tr> <td>2017-05-16</td> <td> <b> Schleimer, Jan-Hendrik<br /> </b> Computational Neurophysiology </td> <td></td> <td></td> <td></td> </tr> <tr> <td>2017-05-09</td> <td> <b> Abreu, Mónica<br /> </b> Systems Biology of Cancer </td> <td>Circadian analysis of the immune system</td> <td></td> <td></td> </tr> <tr> <td>2017-05-02</td> <td> <b> Reifenstein, Eric<br /> </b> Computational Neurophysiology </td> <td>Sequence learning in rats and humans</td> <td></td> <td></td> </tr> <tr> <td>2017-04-25</td> <td> <b> Michalikova, Martina<br /> </b> Theoretical Neuroscience </td> <td>Post-journal utopia & how to move there faster.</td> <td></td> <td></td> </tr> <tr> <td>2017-04-04</td> <td> <b> Genov, Nikolai<br /> </b> Systems Biology of Cancer </td> <td>Ultradian rhythms are evolutionary more conserved and play key roles in vital cellular functions.</td> <td></td> <td></td> </tr> <tr> <td>2017-03-28</td> <td> <b> McColgan, Thomas<br /> </b> Theoretical Neuroscience </td> <td>Report of the GPU modeling retreat</td> <td></td> <td></td> </tr> <tr> <td>2017-03-21</td> <td> <b> Meisig, Johannes<br /> </b> Systems Biology of Molecular Networks </td> <td>Modeling gene expression in spontaneous and perturbed differentiation</td> <td></td> <td></td> </tr> <tr> <td>2017-03-14</td> <td> <b> Evangelista, Roberta<br /> </b> Theoretical Neuroscience </td> <td>Bistable activation of CA3 interneurons can explain the generation of sharp wave-ripple oscillations</td> <td></td> <td></td> </tr> <tr> <td>2017-03-07</td> <td> <b> Kremkow, Jens<br /> </b> Theoretical Neuroscience </td> <td>What causes a cortical action potential, in vivo?</td> <td></td> <td></td> </tr> <tr> <td>2017-02-28</td> <td> <b> <a href="wiki/members/elathman">El-Athman, Rukeia</a><br /> </b> Systems Biology of Cancer </td> <td>Molecular Modelling of the Oligomeric Pore of the Tight Junction Protein Claudin-10b</td> <td></td> <td></td> </tr> <tr> <td>2017-02-14</td> <td> <b> Knoop, Henning<br /> </b> Metabolic Networks </td> <td>Metabolic modeling of cyanobacteria</td> <td></td> <td></td> </tr> <tr> <td>2017-02-07</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/klinger">Klinger, Bertram</a><br /> </b> Systems Biology of Molecular Networks </td> <td>The coffee ring effect</td> <td></td> <td></td> </tr> <tr> <td>2017-01-31</td> <td> <b> Holzbecher, André<br /> </b> Theoretical Neuroscience </td> <td>Memory - how we remember places, and why electrical synapses might play a role in that</td> <td></td> <td></td> </tr> <tr> <td>2017-01-17</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/herzel">Herzel, Hanspeter (PI)</a><br /> </b> Molecular and Cellular Evolution </td> <td>Modeling rhythms in cells, tissues, and organisms</td> <td><a href="/wiki/_media/itbmeeting/2017-01-17_herzel.pdf" class="media mediafile mf_pdf" title="itbmeeting:2017-01-17_herzel.pdf">2017-01-17_herzel.pdf</a></td> <td></td> </tr> <tr> <td>2017-01-10</td> <td> <b> <a href="~hesse">Hesse, Janina</a><br /> </b> Computational Neurophysiology </td> <td>Trace your favorite drawings - getting around copy rights with inkscape</td> <td></td> <td></td> </tr> <tr> <td>2016-12-13</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/wiki/members/grosstor">Gross, Torsten</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Finding patterns in perturbation data that reveal an underlying network</td> <td></td> <td></td> </tr> <tr> <td>2016-11-29</td> <td> <b> <a href="wiki/members/fuhr/">Fuhr, Luise</a><br /> </b> Systems Biology of Cancer </td> <td>Clock-genes and mitochondrial respiratory activity: Evidence of a reciprocal interplay.</td> <td></td> <td></td> </tr> <tr> <td>2016-11-29</td> <td> <b> <a href="http://www.sys-bio.net/">Bluethgen, Nils (PI)</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Noise in cancer</td> <td></td> <td></td> </tr> <tr> <td>2016-11-22</td> <td> <b> Baranov, Olga<br /> </b> Research on Complex Systems </td> <td>Real world networks</td> <td></td> <td></td> </tr> <tr> <td>2016-11-08</td> <td> <b> <a href="wiki/members/donoso">Donoso, José R.</a><br /> </b> Theoretical Neuroscience </td> <td>Microvision in cyanobacteria (<a href="http://dx.doi.org/10.7554/eLife.12620">http://dx.doi.org/10.7554/eLife.12620</a>)</td> <td><a href="/wiki/_media/itbmeeting/2016-11-08_donoso.pdf" class="media mediafile mf_pdf" title="itbmeeting:2016-11-08_donoso.pdf">2016-11-08_donoso.pdf</a></td> <td></td> </tr> <tr> <td>2016-11-01</td> <td> <b> <a href="https://itb.biologie.hu-berlin.de/~benary">Benary, Manuela</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Project proposal</td> <td></td> <td></td> </tr> <tr> <td>2016-10-25</td> <td> <b> Maier, Benjamin<br /> </b> </td> <td>Flockworks: A class of dynamic network models for face-to-face interactions</td> <td></td> <td></td> </tr> <tr> <td>2016-10-18</td> <td> <b> <a href="wiki/members/witzel">Witzel, Franziska</a><br /> </b> Systems Biology of Molecular Networks </td> <td>Oncogene-induced Senescence</td> <td><a href="/wiki/_media/itbmeeting/2016-10-18_witzel.pdf" class="media mediafile mf_pdf" title="itbmeeting:2016-10-18_witzel.pdf">2016-10-18_witzel.pdf</a></td> <td></td> </tr> <tr> <td>2016-10-11</td> <td> <b> <a href="~bordyugov">Bordyugov, Grischa</a><br /> </b> Molecular and Cellular Evolution </td> <td>Programming with closures for fun and profit</td> <td><a href="/wiki/_media/itbmeeting/2016-10-11_bordyugov.pdf" class="media mediafile mf_pdf" title="itbmeeting:2016-10-11_bordyugov.pdf">2016-10-11_bordyugov.pdf</a></td> <td></td> </tr> </tbody> </table> <h2 id="organisation">Organisation</h2> <p> If it is your turn at the ITB meeting, please prepare a short talk (15 min + 5 min discussion) that is related to your research (your own project or a very interesting finding of other groups). Please make sure that the video-projector and laptop are in place at 14:00. If you are scheduled for House 4 - the projector is already installed in the seminar room. If you are unable to give the talk at the date indicated, please find a replacement. </p> <p> Titles for the talks should be sent until sunday to: <a href="mailto:konigmatt@googlemail.com">Matthias König</a> </p> <p> Thank you for your effort to keep ITB a vital and exciting meeting point for theoretical and experimental biologists! </p> <h2 id="alumni">Meeting Alumni</h2> <table class="table"> <thead> <tr> <th>Name</th> <th>Group</th> </tr> </thead> <tbody> <tr> <td><b> <a href="wiki/members/westerm">Westermark, Pål (PI)</a> </b></td> <td>Systems Biology of Aging and the Circadian</td> </tr> <tr> <td><b> <a href="~wilmes">Wilmes, Katharina</a> </b></td> <td>Computational Neurophysiology</td> </tr> <tr> <td><b> <a href="wiki/members/frederic">Roemschied, Frederic</a> </b></td> <td>Computational Neurophysiology</td> </tr> <tr> <td><b> <a href="wiki/members/nikolay">Chenkov, Nikolay</a> </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> Westermark, Stefanie </b></td> <td>Metabolic Networks</td> </tr> <tr> <td><b> Lehmann, Robert </b></td> <td>Celldeg.com</td> </tr> <tr> <td><b> Ruegen, Marco </b></td> <td>Metabolic Networks</td> </tr> <tr> <td><b> Lueck, Sarah </b></td> <td>Systems Biology of Aging and the Circadian Clock</td> </tr> <tr> <td><b> Knoop, Henning </b></td> <td>Metabolic Networks</td> </tr> <tr> <td><b> Thaben, Paul </b></td> <td>Systems Biology of Aging and the Circadian Clock</td> </tr> <tr> <td><b> <a href="~bordyugov">Bordyugov, Grischa</a> </b></td> <td>Molecular and Cellular Evolution</td> </tr> <tr> <td><b> Zug, Roman </b></td> <td>Evolution of Organismic Systems</td> </tr> <tr> <td><b> McColgan, Thomas </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> Michalikova, Martina </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> <a href="wiki/members/fuhr/">Fuhr, Luise</a> </b></td> <td>Systems Biology of Cancer</td> </tr> <tr> <td><b> <a href="wiki/members/donoso">Donoso, José R.</a> </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> <a href="~hesse">Hesse, Janina</a> </b></td> <td>Computational Neurophysiology</td> </tr> <tr> <td><b> Ünal, Evrim Besray </b></td> <td>Systems Biology of Molecular Networks</td> </tr> <tr> <td><b> Kremkow, Jens </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> Abreu, Mónica </b></td> <td>Systems Biology of Cancer</td> </tr> <tr> <td><b> Remme, Michiel </b></td> <td>Computational Neurophysiology and Neuroscience</td> </tr> <tr> <td><b> Holzbecher, André </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> <a href="wiki/members/witzel">Witzel, Franziska</a> </b></td> <td>Systems Biology of Molecular Networks</td> </tr> <tr> <td><b> Pett, Patrick </b></td> <td>Molecular and Cellular Evolution</td> </tr> <tr> <td><b> Baranov, Olga </b></td> <td>Research on Complex Systems</td> </tr> <tr> <td><b> Clara Jongen </b></td> <td>Research on Complex Systems</td> </tr> <tr> <td><b> Rydenfelt, Mattias </b></td> <td>Systems Biology of Molecular Networks</td> </tr> <tr> <td><b> Evangelista, Roberta </b></td> <td>Theoretical Neuroscience</td> </tr> <tr> <td><b> Genov, Nikolai </b></td> <td>Systems Biology of Cancer</td> </tr> <tr> <td><b> <a href="wiki/members/elathman">El-Athman, Rukeia</a> </b></td> <td>Systems Biology of Cancer</td> </tr> <tr> <td><b> Li, Yin </b></td> <td>Systems Biology of Cancer</td> </tr> </tbody> </table> </html> Log In